Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SNCGO76070 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC11.97□□□□□ -0.49
SNCGO76070 CSPG4P11-201ENST00000560634 4910 ntBASIC11.97□□□□□ -0.49
SNCGO76070 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
SNCGO76070 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SNCGO76070 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SNCGO76070 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SNCGO76070 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SNCGO76070 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SNCGO76070 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SNCGO76070 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SNCGO76070 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC11.97□□□□□ -0.49
SNCGO76070 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC11.97□□□□□ -0.49
SNCGO76070 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SNCGO76070 AC116351.2-201ENST00000606540 1585 ntBASIC11.96□□□□□ -0.49
SNCGO76070 AC132872.4-202ENST00000622924 2756 ntBASIC11.96□□□□□ -0.49
SNCGO76070 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC11.96□□□□□ -0.49
SNCGO76070 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SNCGO76070 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
SNCGO76070 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC11.96□□□□□ -0.49
SNCGO76070 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SNCGO76070 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SNCGO76070 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SNCGO76070 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
SNCGO76070 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SNCGO76070 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
SNCGO76070 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
SNCGO76070 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SNCGO76070 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SNCGO76070 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SNCGO76070 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SNCGO76070 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC11.96□□□□□ -0.49
SNCGO76070 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
SNCGO76070 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SNCGO76070 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SNCGO76070 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
SNCGO76070 EBPL-204ENST00000378272 766 ntTSL 3 BASIC11.96□□□□□ -0.49
SNCGO76070 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
SNCGO76070 OR2A1-AS1-204ENST00000470435 602 ntBASIC11.96□□□□□ -0.49
SNCGO76070 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC11.96□□□□□ -0.49
SNCGO76070 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC11.96□□□□□ -0.49
SNCGO76070 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
SNCGO76070 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
SNCGO76070 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC11.96□□□□□ -0.5
SNCGO76070 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
SNCGO76070 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SNCGO76070 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC11.96□□□□□ -0.5
SNCGO76070 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
SNCGO76070 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SNCGO76070 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SNCGO76070 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
SNCGO76070 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
SNCGO76070 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
SNCGO76070 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SNCGO76070 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
SNCGO76070 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SNCGO76070 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
SNCGO76070 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SNCGO76070 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
SNCGO76070 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.5
SNCGO76070 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC11.96□□□□□ -0.5
SNCGO76070 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
SNCGO76070 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SNCGO76070 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC11.95□□□□□ -0.5
SNCGO76070 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC11.95□□□□□ -0.5
SNCGO76070 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC11.95□□□□□ -0.5
SNCGO76070 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC11.95□□□□□ -0.5
SNCGO76070 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
SNCGO76070 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC11.95□□□□□ -0.5
SNCGO76070 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC11.95□□□□□ -0.5
SNCGO76070 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC11.95□□□□□ -0.5
SNCGO76070 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC11.95□□□□□ -0.5
SNCGO76070 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
SNCGO76070 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.95□□□□□ -0.5
SNCGO76070 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 MCRIP2P1-201ENST00000394346 511 ntBASIC11.95□□□□□ -0.5
SNCGO76070 NME1-207ENST00000480143 964 ntTSL 2 BASIC11.95□□□□□ -0.5
SNCGO76070 HES2-205ENST00000487437 968 ntTSL 3 BASIC11.95□□□□□ -0.5
SNCGO76070 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC11.95□□□□□ -0.5
SNCGO76070 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
SNCGO76070 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 AC104187.1-201ENST00000607510 612 ntBASIC11.95□□□□□ -0.5
SNCGO76070 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
SNCGO76070 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
SNCGO76070 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
SNCGO76070 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
SNCGO76070 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms