Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MBD3L5A6NJ08 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.52■□□□□ 0.08
MBD3L5A6NJ08 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
MBD3L5A6NJ08 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MBD3L5A6NJ08 AC108751.1-201ENST00000490852 363 ntBASIC15.52■□□□□ 0.08
MBD3L5A6NJ08 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MBD3L5A6NJ08 AC092865.5-201ENST00000545435 363 ntBASIC15.52■□□□□ 0.08
MBD3L5A6NJ08 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.52■□□□□ 0.08
MBD3L5A6NJ08 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MBD3L5A6NJ08 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
MBD3L5A6NJ08 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
MBD3L5A6NJ08 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.52■□□□□ 0.07
MBD3L5A6NJ08 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MBD3L5A6NJ08 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
MBD3L5A6NJ08 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
MBD3L5A6NJ08 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
MBD3L5A6NJ08 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC15.52■□□□□ 0.07
MBD3L5A6NJ08 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
MBD3L5A6NJ08 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MBD3L5A6NJ08 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 AC006504.4-201ENST00000592118 1568 ntBASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 RNA5SP416-201ENST00000516838 111 ntBASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
MBD3L5A6NJ08 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 AC040169.1-201ENST00000565382 521 ntBASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MBD3L5A6NJ08 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.49■□□□□ 0.07
MBD3L5A6NJ08 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.49■□□□□ 0.07
MBD3L5A6NJ08 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
MBD3L5A6NJ08 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
MBD3L5A6NJ08 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.49■□□□□ 0.07
MBD3L5A6NJ08 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MBD3L5A6NJ08 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
MBD3L5A6NJ08 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.49■□□□□ 0.07
MBD3L5A6NJ08 ABALON-201ENST00000629058 1903 ntBASIC15.49■□□□□ 0.07
MBD3L5A6NJ08 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MBD3L5A6NJ08 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MBD3L5A6NJ08 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MBD3L5A6NJ08 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.49■□□□□ 0.07
MBD3L5A6NJ08 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.49■□□□□ 0.07
MBD3L5A6NJ08 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.49■□□□□ 0.07
MBD3L5A6NJ08 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms