Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 AC002558.1-201ENST00000488906 803 ntBASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 AC122714.2-201ENST00000502787 707 ntBASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 AL358472.4-201ENST00000633140 710 ntBASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CCSER1Q9C0I3 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 TPSP2-201ENST00000561760 610 ntBASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.84■□□□□ 0.77
CCSER1Q9C0I3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 AC108860.2-201ENST00000562760 2183 ntBASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 AC019129.2-201ENST00000609837 1235 ntBASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.83■□□□□ 0.77
CCSER1Q9C0I3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCSER1Q9C0I3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.83■□□□□ 0.76
CCSER1Q9C0I3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.83■□□□□ 0.76
CCSER1Q9C0I3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCSER1Q9C0I3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CCSER1Q9C0I3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CCSER1Q9C0I3 AC233702.3-201ENST00000578656 1387 ntBASIC19.83■□□□□ 0.76
CCSER1Q9C0I3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 LYSMD4-203ENST00000378904 2122 ntBASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 KRT18P1-202ENST00000452408 1331 ntBASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 VENTXP7-201ENST00000475503 772 ntBASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 AC009533.2-201ENST00000543664 586 ntBASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCSER1Q9C0I3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms