Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 PHKB-203ENST00000563376 697 ntTSL 315.28■□□□□ 0.043e-7■■□□□ 13.8
MATR3P43243 PHKB-206ENST00000565424 828 ntTSL 35.01□□□□□ -1.613e-7■■□□□ 13.8
MATR3P43243 PHKB-205ENST00000564873 1493 ntTSL 33.79□□□□□ -1.83e-7■■□□□ 13.8
MATR3P43243 CEP164-202ENST00000525416 778 ntAPPRIS ALT2 TSL 321.56■■□□□ 1.046e-7■■□□□ 13.8
MATR3P43243 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.276e-7■■□□□ 13.8
MATR3P43243 CEP164-208ENST00000533153 585 ntAPPRIS ALT2 TSL 314.44□□□□□ -0.16e-7■■□□□ 13.8
MATR3P43243 CEP164-203ENST00000525734 616 ntAPPRIS ALT2 TSL 211.75□□□□□ -0.536e-7■■□□□ 13.8
MATR3P43243 INSIG2-203ENST00000467223 627 ntTSL 521.09■□□□□ 0.972e-14■■□□□ 13.8
MATR3P43243 INSIG2-202ENST00000411929 574 ntTSL 217.05■□□□□ 0.322e-14■■□□□ 13.8
MATR3P43243 INSIG2-206ENST00000485520 3185 ntTSL 511.67□□□□□ -0.542e-14■■□□□ 13.8
MATR3P43243 INSIG2-204ENST00000471186 2100 ntTSL 59.93□□□□□ -0.822e-14■■□□□ 13.8
MATR3P43243 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.982e-14■■□□□ 13.8
MATR3P43243 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.03□□□□□ -1.442e-14■■□□□ 13.8
MATR3P43243 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC23.35■■□□□ 1.336e-6■■□□□ 13.8
MATR3P43243 CSNK1D-215ENST00000580784 1081 ntTSL 1 (best)23.26■■□□□ 1.311e-6■■□□□ 13.8
MATR3P43243 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC22.92■■□□□ 1.266e-6■■□□□ 13.8
MATR3P43243 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.186e-6■■□□□ 13.8
MATR3P43243 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.041e-6■■□□□ 13.8
MATR3P43243 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.034e-6■■□□□ 13.8
MATR3P43243 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.014e-6■■□□□ 13.8
MATR3P43243 USP22-209ENST00000579645 1906 ntTSL 521.25■□□□□ 0.994e-6■■□□□ 13.8
MATR3P43243 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.14■□□□□ 0.972e-7■■□□□ 13.8
MATR3P43243 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.96■□□□□ 0.952e-7■■□□□ 13.8
MATR3P43243 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC20.96■□□□□ 0.954e-6■■□□□ 13.8
MATR3P43243 ARMC8-209ENST00000468560 829 ntTSL 320.36■□□□□ 0.854e-6■■□□□ 13.8
MATR3P43243 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.834e-6■■□□□ 13.8
MATR3P43243 USP22-204ENST00000476111 573 ntTSL 320.05■□□□□ 0.84e-6■■□□□ 13.8
MATR3P43243 PEF1-207ENST00000492061 936 ntTSL 320.04■□□□□ 0.84e-6■■□□□ 13.8
MATR3P43243 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.756e-6■■□□□ 13.8
MATR3P43243 SLC35G2-203ENST00000472200 2837 ntTSL 219.71■□□□□ 0.754e-6■■□□□ 13.8
MATR3P43243 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.51■□□□□ 0.712e-7■■□□□ 13.8
MATR3P43243 SIVA1-205ENST00000553819 856 ntTSL 319.24■□□□□ 0.674e-6■■□□□ 13.8
MATR3P43243 EHMT1-243ENST00000637593 100 ntTSL 519.23■□□□□ 0.674e-6■■□□□ 13.8
MATR3P43243 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.654e-6■■□□□ 13.8
MATR3P43243 CSNK1D-201ENST00000269361 1088 ntTSL 519.09■□□□□ 0.651e-6■■□□□ 13.8
MATR3P43243 CSNK1D-214ENST00000580565 566 ntTSL 419.09■□□□□ 0.651e-6■■□□□ 13.8
MATR3P43243 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.98■□□□□ 0.631e-6■■□□□ 13.8
MATR3P43243 CSNK1D-205ENST00000403276 1040 ntTSL 218.39■□□□□ 0.531e-6■■□□□ 13.8
MATR3P43243 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.64■□□□□ 0.414e-6■■□□□ 13.8
MATR3P43243 PEF1-204ENST00000472443 687 ntTSL 316.88■□□□□ 0.294e-6■■□□□ 13.8
MATR3P43243 PEF1-206ENST00000489164 865 ntTSL 516.88■□□□□ 0.294e-6■■□□□ 13.8
MATR3P43243 CSNK1D-217ENST00000581241 6094 ntTSL 216.87■□□□□ 0.291e-6■■□□□ 13.8
MATR3P43243 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.52■□□□□ 0.244e-6■■□□□ 13.8
MATR3P43243 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.211e-6■■□□□ 13.8
MATR3P43243 RTN4-210ENST00000427710 589 ntTSL 416.3■□□□□ 0.22e-7■■□□□ 13.8
MATR3P43243 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.184e-6■■□□□ 13.8
MATR3P43243 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.184e-6■■□□□ 13.8
MATR3P43243 ARMC8-203ENST00000461600 731 ntTSL 515.82■□□□□ 0.124e-6■■□□□ 13.8
MATR3P43243 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.114e-6■■□□□ 13.8
MATR3P43243 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC15.75■□□□□ 0.112e-7■■□□□ 13.8
MATR3P43243 ARMC8-207ENST00000466749 807 ntTSL 415.74■□□□□ 0.114e-6■■□□□ 13.8
MATR3P43243 RAB28-205ENST00000508274 1551 ntTSL 1 (best)15.61■□□□□ 0.096e-6■■□□□ 13.8
MATR3P43243 MARCH7-205ENST00000421037 559 ntTSL 415.6■□□□□ 0.094e-6■■□□□ 13.8
MATR3P43243 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.42■□□□□ 0.064e-6■■□□□ 13.8
MATR3P43243 CSNK1D-224ENST00000584672 401 ntTSL 315.35■□□□□ 0.051e-6■■□□□ 13.8
MATR3P43243 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.024e-6■■□□□ 13.8
MATR3P43243 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.024e-6■■□□□ 13.8
MATR3P43243 CSNK1D-208ENST00000578501 1124 ntTSL 214.88□□□□□ -0.031e-6■■□□□ 13.8
MATR3P43243 CSNK1D-220ENST00000581737 631 ntTSL 214.7□□□□□ -0.061e-6■■□□□ 13.8
MATR3P43243 ASB1-209ENST00000491653 818 ntTSL 214.68□□□□□ -0.061e-8■■□□□ 13.8
MATR3P43243 CSNK1D-222ENST00000584377 2891 ntTSL 214.49□□□□□ -0.091e-6■■□□□ 13.8
MATR3P43243 ADCY9-204ENST00000572288 772 ntTSL 414.2□□□□□ -0.144e-6■■□□□ 13.8
MATR3P43243 AP000897.1-201ENST00000584036 1613 ntBASIC13.97□□□□□ -0.174e-6■■□□□ 13.8
MATR3P43243 ADCY9-202ENST00000571467 569 ntTSL 513.93□□□□□ -0.184e-6■■□□□ 13.8
MATR3P43243 PEF1-208ENST00000496805 742 ntTSL 513.92□□□□□ -0.184e-6■■□□□ 13.8
MATR3P43243 ARMC8-201ENST00000358441 3181 ntTSL 1 (best) BASIC13.25□□□□□ -0.294e-6■■□□□ 13.8
MATR3P43243 MARCH7-209ENST00000539065 3303 ntTSL 2 BASIC13.1□□□□□ -0.314e-6■■□□□ 13.8
MATR3P43243 PINX1-205ENST00000523559 778 ntTSL 312.93□□□□□ -0.344e-6■■□□□ 13.8
MATR3P43243 USP22-211ENST00000584538 554 ntTSL 412.92□□□□□ -0.344e-6■■□□□ 13.8
MATR3P43243 SIVA1-208ENST00000556431 4142 ntTSL 212.74□□□□□ -0.374e-6■■□□□ 13.8
MATR3P43243 PINX1-203ENST00000519088 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.424e-6■■□□□ 13.8
MATR3P43243 RTN4-211ENST00000438462 656 ntTSL 511.69□□□□□ -0.542e-7■■□□□ 13.8
MATR3P43243 PEF1-205ENST00000478502 750 ntTSL 211.49□□□□□ -0.574e-6■■□□□ 13.8
MATR3P43243 USP22-202ENST00000455117 677 ntTSL 511.2□□□□□ -0.624e-6■■□□□ 13.8
MATR3P43243 MARCH7-207ENST00000473749 821 ntTSL 310.96□□□□□ -0.654e-6■■□□□ 13.8
MATR3P43243 ASB1-205ENST00000468122 493 ntTSL 510.67□□□□□ -0.71e-8■■□□□ 13.8
MATR3P43243 SPATA5-202ENST00000422835 2492 ntTSL 1 (best)10.33□□□□□ -0.764e-6■■□□□ 13.8
MATR3P43243 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC10.25□□□□□ -0.772e-7■■□□□ 13.8
MATR3P43243 AC010997.6-201ENST00000623230 1645 ntBASIC10.09□□□□□ -0.794e-6■■□□□ 13.8
MATR3P43243 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC9.98□□□□□ -0.814e-6■■□□□ 13.8
MATR3P43243 DOK6-205ENST00000584435 529 ntTSL 39.84□□□□□ -0.834e-6■■□□□ 13.8
MATR3P43243 PINX1-208ENST00000524114 610 ntAPPRIS ALT2 TSL 39.81□□□□□ -0.844e-6■■□□□ 13.8
MATR3P43243 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.76□□□□□ -1.172e-7■■□□□ 13.8
MATR3P43243 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.244e-6■■□□□ 13.8
MATR3P43243 RAB28-207ENST00000511649 715 ntTSL 56.91□□□□□ -1.36e-6■■□□□ 13.8
MATR3P43243 DOK6-203ENST00000582172 502 ntTSL 36.87□□□□□ -1.314e-6■■□□□ 13.8
MATR3P43243 KDM4C-209ENST00000489243 1439 ntTSL 26.59□□□□□ -1.364e-6■■□□□ 13.8
MATR3P43243 ARMC8-216ENST00000471709 691 ntTSL 34.72□□□□□ -1.654e-6■■□□□ 13.8
MATR3P43243 PINX1-207ENST00000524061 440 ntTSL 54.7□□□□□ -1.664e-6■■□□□ 13.8
MATR3P43243 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.19□□□□□ -1.742e-7■■□□□ 13.8
MATR3P43243 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.06□□□□□ -1.762e-7■■□□□ 13.8
MATR3P43243 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.834e-6■■□□□ 13.8
MATR3P43243 FAM169A-204ENST00000510609 5908 ntTSL 1 (best)15.31■□□□□ 0.041e-10■■□□□ 13.8
MATR3P43243 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.89□□□□□ -1.631e-10■■□□□ 13.8
MATR3P43243 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.691e-10■■□□□ 13.8
MATR3P43243 ZNF655-217ENST00000452314 545 ntTSL 219.62■□□□□ 0.732e-7■■□□□ 13.8
MATR3P43243 ZNF655-209ENST00000422422 782 ntTSL 313.56□□□□□ -0.242e-7■■□□□ 13.8
MATR3P43243 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.18■□□□□ 0.181e-12■■□□□ 13.8
MATR3P43243 CDC14B-211ENST00000481149 689 ntTSL 312.89□□□□□ -0.351e-6■■□□□ 13.8
MATR3P43243 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.59■■□□□ 1.211e-6■■□□□ 13.8
Retrieved 100 of 16,209 protein–RNA pairs in 90.4 ms