RNA–Protein interactions for RNA: ENST00000492061.5

PEF1-207, Transcript of penta-EF-hand domain containing 1, humanhuman

TSL 3

Gene PEF1, Length 936 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-207ENST00000492061 NISCHQ9Y2I1 1504 aa43.48■■■■■ 4.55
PEF1-207ENST00000492061 CCDC180Q9P1Z9 1646 aa38.39■■■■□ 3.74
PEF1-207ENST00000492061 ABCC9O60706 1549 aa36.79■■■■□ 3.48
PEF1-207ENST00000492061 ZCCHC6Q5VYS8 1495 aaKnown RBP36.35■■■■□ 3.41
PEF1-207ENST00000492061 DCAF1Q9Y4B6 1507 aa36.02■■■■□ 3.36
PEF1-207ENST00000492061 DCAF8L2P0C7V8 631 aa35.94■■■■□ 3.34
PEF1-207ENST00000492061 MYO15BQ96JP2 1530 aa35.9■■■■□ 3.34
PEF1-207ENST00000492061 NACADO15069 1562 aa35.87■■■■□ 3.33
PEF1-207ENST00000492061 RB1CC1Q8TDY2 1594 aa35.73■■■■□ 3.31
PEF1-207ENST00000492061 UNC13AQ9UPW8 1703 aa35.14■■■■□ 3.22
PEF1-207ENST00000492061 SCRIBQ14160 1630 aa35.03■■■■□ 3.2
PEF1-207ENST00000492061 SHROOM4Q9ULL8 1493 aa34.7■■■■□ 3.15
PEF1-207ENST00000492061 BICRAQ9NZM4 1560 aa34.7■■■■□ 3.14
PEF1-207ENST00000492061 PABPN1Q86U42 306 aaKnown RBP eCLIP34.48■■■■□ 3.11
PEF1-207ENST00000492061 CECR2Q9BXF3 1484 aa33.79■■■■□ 3
PEF1-207ENST00000492061 EIF4G1Q04637 1599 aaKnown RBP33.67■■■□□ 2.98
PEF1-207ENST00000492061 BAZ1AQ9NRL2 1556 aaPredicted RBP33.63■■■□□ 2.97
PEF1-207ENST00000492061 SMARCA4P51532 1647 aa33.61■■■□□ 2.97
PEF1-207ENST00000492061 MROH2BQ7Z745 1585 aa33.52■■■□□ 2.96
PEF1-207ENST00000492061 CC2D2AQ9P2K1 1620 aa33.38■■■□□ 2.93
PEF1-207ENST00000492061 RSF1Q96T23 1441 aaPredicted RBP33.37■■■□□ 2.93
PEF1-207ENST00000492061 PEG3Q9GZU2 1588 aa33.28■■■□□ 2.92
PEF1-207ENST00000492061 WIZO95785 1651 aa33.26■■■□□ 2.91
PEF1-207ENST00000492061 ATAD2BQ9ULI0 1458 aa33.2■■■□□ 2.91
PEF1-207ENST00000492061 SMARCA2P51531 1590 aa33.19■■■□□ 2.9
PEF1-207ENST00000492061 DNAJC5BQ9UF47 199 aa33.17■■■□□ 2.9
PEF1-207ENST00000492061 NCAPD3P42695 1498 aa33.08■■■□□ 2.89
PEF1-207ENST00000492061 SUPT5HO00267 1087 aaKnown RBP33■■■□□ 2.87
PEF1-207ENST00000492061 HMGXB3Q12766 1538 aa32.99■■■□□ 2.87
PEF1-207ENST00000492061 BAZ1BQ9UIG0 1483 aaKnown RBP32.93■■■□□ 2.86
PEF1-207ENST00000492061 TOP2AP11388 1531 aaKnown RBP32.87■■■□□ 2.85
PEF1-207ENST00000492061 CCDC88BA6NC98 1476 aa32.49■■■□□ 2.79
PEF1-207ENST00000492061 CADPSQ9ULU8 1353 aa32.13■■■□□ 2.73
PEF1-207ENST00000492061 LAMC3Q9Y6N6 1575 aa32.11■■■□□ 2.73
PEF1-207ENST00000492061 CFTRP13569 1480 aa32.11■■■□□ 2.73
PEF1-207ENST00000492061 PRDM2Q13029 1718 aa32.09■■■□□ 2.73
PEF1-207ENST00000492061 NESP48681 1621 aa32.08■■■□□ 2.73
PEF1-207ENST00000492061 KIF21AQ7Z4S6 1674 aa31.81■■■□□ 2.68
PEF1-207ENST00000492061 PDS5BQ9NTI5 1447 aa31.8■■■□□ 2.68
PEF1-207ENST00000492061 FANCD2Q9BXW9 1451 aa31.76■■■□□ 2.67
PEF1-207ENST00000492061 CEP164Q9UPV0 1460 aa31.64■■■□□ 2.66
PEF1-207ENST00000492061 ERCC6Q03468 1493 aa31.59■■■□□ 2.65
PEF1-207ENST00000492061 ABCC8Q09428 1581 aa31.53■■■□□ 2.64
PEF1-207ENST00000492061 THOC2Q8NI27 1593 aaKnown RBP31.47■■■□□ 2.63
PEF1-207ENST00000492061 MRC2Q9UBG0 1479 aa31.45■■■□□ 2.62
PEF1-207ENST00000492061 URB2Q14146 1524 aaKnown RBP31.43■■■□□ 2.62
PEF1-207ENST00000492061 WRNQ14191 1432 aaPredicted RBP eCLIP31.41■■■□□ 2.62
PEF1-207ENST00000492061 CUX1P39880 1505 aa31.4■■■□□ 2.62
PEF1-207ENST00000492061 DNMBPQ6XZF7 1577 aa31.39■■■□□ 2.61
PEF1-207ENST00000492061 BIVM-ERCC5R4GMW8 1640 aa31.37■■■□□ 2.61
PEF1-207ENST00000492061 SYNJ1O43426 1573 aa31.36■■■□□ 2.61
PEF1-207ENST00000492061 WDR62O43379 1518 aa31.36■■■□□ 2.61
PEF1-207ENST00000492061 TOPBP1Q92547 1522 aa31.36■■■□□ 2.61
PEF1-207ENST00000492061 TOP2BQ02880 1626 aa31.34■■■□□ 2.61
PEF1-207ENST00000492061 CHIC1Q5VXU3 224 aa31.28■■■□□ 2.6
PEF1-207ENST00000492061 FGD5Q6ZNL6 1462 aa31.15■■■□□ 2.58
PEF1-207ENST00000492061 TRIM41Q8WV44 630 aa31.14■■■□□ 2.58
PEF1-207ENST00000492061 POLA1P09884 1462 aaPredicted RBP31.13■■■□□ 2.57
PEF1-207ENST00000492061 CUX2O14529 1486 aa31.08■■■□□ 2.57
PEF1-207ENST00000492061 TARBP1Q13395 1621 aaKnown RBP31.02■■■□□ 2.56
PEF1-207ENST00000492061 SOGA1O94964 1423 aa31■■■□□ 2.55
PEF1-207ENST00000492061 RAD54L2Q9Y4B4 1467 aa30.99■■■□□ 2.55
PEF1-207ENST00000492061 WDR97A6NE52 1622 aa30.98■■■□□ 2.55
PEF1-207ENST00000492061 IFT140Q96RY7 1462 aa30.95■■■□□ 2.54
PEF1-207ENST00000492061 ABCA10Q8WWZ4 1543 aa30.9■■■□□ 2.54
PEF1-207ENST00000492061 ZNF608Q9ULD9 1512 aaPredicted RBP30.78■■■□□ 2.52
PEF1-207ENST00000492061 ABCA5Q8WWZ7 1642 aa30.75■■■□□ 2.51
PEF1-207ENST00000492061 TDRD9Q8NDG6 1382 aaKnown RBP30.73■■■□□ 2.51
PEF1-207ENST00000492061 RUSC2Q8N2Y8 1516 aa30.72■■■□□ 2.51
PEF1-207ENST00000492061 EIF4G3O43432 1585 aaKnown RBP30.71■■■□□ 2.51
PEF1-207ENST00000492061 KIF27Q86VH2 1401 aa30.69■■■□□ 2.5
PEF1-207ENST00000492061 AQRO60306 1485 aaKnown RBP eCLIP30.69■■■□□ 2.5
PEF1-207ENST00000492061 PBRM1Q86U86 1689 aa30.66■■■□□ 2.5
PEF1-207ENST00000492061 GAPVD1Q14C86 1478 aa30.66■■■□□ 2.5
PEF1-207ENST00000492061 EEA1Q15075 1411 aa30.58■■■□□ 2.49
PEF1-207ENST00000492061 ERICH3Q5RHP9 1530 aa30.55■■■□□ 2.48
PEF1-207ENST00000492061 GRIN2BQ13224 1484 aa30.54■■■□□ 2.48
PEF1-207ENST00000492061 IGF1RP08069 1367 aa30.52■■■□□ 2.48
PEF1-207ENST00000492061 FAM9AQ8IZU1 332 aaPredicted RBP30.47■■■□□ 2.47
PEF1-207ENST00000492061 CSRNP3Q8WYN3 585 aa30.45■■■□□ 2.47
PEF1-207ENST00000492061 CUL7Q14999 1698 aa30.43■■■□□ 2.46
PEF1-207ENST00000492061 SNAPC4Q5SXM2 1469 aa30.4■■■□□ 2.46
PEF1-207ENST00000492061 MAGI1Q96QZ7 1491 aaPredicted RBP30.39■■■□□ 2.46
PEF1-207ENST00000492061 ADAMTS12P58397 1594 aa30.37■■■□□ 2.45
PEF1-207ENST00000492061 CARMIL1Q5VZK9 1371 aa30.33■■■□□ 2.45
PEF1-207ENST00000492061 PRXQ9BXM0 1461 aa30.32■■■□□ 2.44
PEF1-207ENST00000492061 FHAD1B1AJZ9 1412 aa30.31■■■□□ 2.44
PEF1-207ENST00000492061 KIF21BO75037 1637 aa30.28■■■□□ 2.44
PEF1-207ENST00000492061 CHD1O14646 1710 aa30.27■■■□□ 2.44
PEF1-207ENST00000492061 SYNJ2O15056 1496 aa30.26■■■□□ 2.44
PEF1-207ENST00000492061 RAPGEF2Q9Y4G8 1499 aa30.24■■■□□ 2.43
PEF1-207ENST00000492061 GRIN2AQ12879 1464 aa30.17■■■□□ 2.42
PEF1-207ENST00000492061 CHMP7Q8WUX9 453 aaPredicted RBP30.16■■■□□ 2.42
PEF1-207ENST00000492061 FBLN2P98095 1184 aa30.11■■■□□ 2.41
PEF1-207ENST00000492061 GOLGA3Q08378 1498 aa30.08■■■□□ 2.41
PEF1-207ENST00000492061 CEP170Q5SW79 1584 aa30.03■■■□□ 2.4
PEF1-207ENST00000492061 CTTNBP2Q8WZ74 1663 aa30.03■■■□□ 2.4
PEF1-207ENST00000492061 NUP160Q12769 1436 aa30.01■■■□□ 2.39
PEF1-207ENST00000492061 LOC105371045A0A1W2PR82 267 aa30■■■□□ 2.39
PEF1-207ENST00000492061 EHMT2Q96KQ7 1210 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms