RNA–Protein interactions for RNA: ENST00000496805.5

PEF1-208, Transcript of penta-EF-hand domain containing 1, humanhuman

TSL 5

Gene PEF1, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-208ENST00000496805 NISCHQ9Y2I1 1504 aa31.8■■■□□ 2.68
PEF1-208ENST00000496805 ABCC9O60706 1549 aa29.88■■■□□ 2.37
PEF1-208ENST00000496805 CCDC180Q9P1Z9 1646 aa29.05■■■□□ 2.24
PEF1-208ENST00000496805 DNAJC5BQ9UF47 199 aa28.8■■■□□ 2.2
PEF1-208ENST00000496805 RB1CC1Q8TDY2 1594 aa28■■■□□ 2.07
PEF1-208ENST00000496805 UNC13AQ9UPW8 1703 aa27.66■■■□□ 2.02
PEF1-208ENST00000496805 PABPN1Q86U42 306 aaKnown RBP eCLIP27.58■■■□□ 2.01
PEF1-208ENST00000496805 NACADO15069 1562 aa27.55■■■□□ 2
PEF1-208ENST00000496805 BICRAQ9NZM4 1560 aa27.35■■□□□ 1.97
PEF1-208ENST00000496805 DCAF8L2P0C7V8 631 aa27.06■■□□□ 1.92
PEF1-208ENST00000496805 CC2D2AQ9P2K1 1620 aa27■■□□□ 1.91
PEF1-208ENST00000496805 DNAJC5Q9H3Z4 198 aa26.98■■□□□ 1.91
PEF1-208ENST00000496805 CECR2Q9BXF3 1484 aa26.96■■□□□ 1.91
PEF1-208ENST00000496805 MYO15BQ96JP2 1530 aa26.8■■□□□ 1.88
PEF1-208ENST00000496805 EIF4G1Q04637 1599 aaKnown RBP26.69■■□□□ 1.86
PEF1-208ENST00000496805 SHROOM4Q9ULL8 1493 aa26.68■■□□□ 1.86
PEF1-208ENST00000496805 SCRIBQ14160 1630 aa26.45■■□□□ 1.82
PEF1-208ENST00000496805 ZCCHC6Q5VYS8 1495 aaKnown RBP26.21■■□□□ 1.79
PEF1-208ENST00000496805 DCAF1Q9Y4B6 1507 aa26.16■■□□□ 1.78
PEF1-208ENST00000496805 CUX2O14529 1486 aa26.05■■□□□ 1.76
PEF1-208ENST00000496805 ERCC6Q03468 1493 aa25.8■■□□□ 1.72
PEF1-208ENST00000496805 TRIM41Q8WV44 630 aa25.49■■□□□ 1.67
PEF1-208ENST00000496805 NESP48681 1621 aa25.46■■□□□ 1.67
PEF1-208ENST00000496805 THOC2Q8NI27 1593 aaKnown RBP25.46■■□□□ 1.67
PEF1-208ENST00000496805 NCAPD3P42695 1498 aa25.39■■□□□ 1.65
PEF1-208ENST00000496805 ATAD2BQ9ULI0 1458 aa25.24■■□□□ 1.63
PEF1-208ENST00000496805 KIF21AQ7Z4S6 1674 aa25.23■■□□□ 1.63
PEF1-208ENST00000496805 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
PEF1-208ENST00000496805 HMGXB3Q12766 1538 aa25.22■■□□□ 1.63
PEF1-208ENST00000496805 SMARCA4P51532 1647 aa25.1■■□□□ 1.61
PEF1-208ENST00000496805 LAMC3Q9Y6N6 1575 aa25.05■■□□□ 1.6
PEF1-208ENST00000496805 BAZ1BQ9UIG0 1483 aaKnown RBP24.96■■□□□ 1.59
PEF1-208ENST00000496805 BAZ1AQ9NRL2 1556 aaPredicted RBP24.94■■□□□ 1.58
PEF1-208ENST00000496805 PEG3Q9GZU2 1588 aa24.8■■□□□ 1.56
PEF1-208ENST00000496805 PDS5BQ9NTI5 1447 aa24.8■■□□□ 1.56
PEF1-208ENST00000496805 WDR62O43379 1518 aa24.8■■□□□ 1.56
PEF1-208ENST00000496805 MRC2Q9UBG0 1479 aa24.77■■□□□ 1.56
PEF1-208ENST00000496805 RIMBP3CA6NJZ7 1639 aa24.65■■□□□ 1.54
PEF1-208ENST00000496805 RIMBP3BA6NNM3 1639 aa24.65■■□□□ 1.54
PEF1-208ENST00000496805 RIMBP3Q9UFD9 1639 aa24.65■■□□□ 1.54
PEF1-208ENST00000496805 MROH2BQ7Z745 1585 aa24.55■■□□□ 1.52
PEF1-208ENST00000496805 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
PEF1-208ENST00000496805 OSCARQ8IYS5 282 aa24.54■■□□□ 1.52
PEF1-208ENST00000496805 CEP164Q9UPV0 1460 aa24.48■■□□□ 1.51
PEF1-208ENST00000496805 ARHGEF11O15085 1522 aa24.4■■□□□ 1.5
PEF1-208ENST00000496805 FANCD2Q9BXW9 1451 aa24.37■■□□□ 1.49
PEF1-208ENST00000496805 WIZO95785 1651 aa24.3■■□□□ 1.48
PEF1-208ENST00000496805 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
PEF1-208ENST00000496805 ZNF608Q9ULD9 1512 aaPredicted RBP24.15■■□□□ 1.46
PEF1-208ENST00000496805 CFTRP13569 1480 aa24.13■■□□□ 1.45
PEF1-208ENST00000496805 TRHP20396 242 aaPredicted RBP24.12■■□□□ 1.45
PEF1-208ENST00000496805 CHD1O14646 1710 aa24.12■■□□□ 1.45
PEF1-208ENST00000496805 ARAP1Q96P48 1450 aa24.12■■□□□ 1.45
PEF1-208ENST00000496805 CYB5RLQ6IPT4 315 aa24.11■■□□□ 1.45
PEF1-208ENST00000496805 PRDM2Q13029 1718 aa24.09■■□□□ 1.45
PEF1-208ENST00000496805 AEBP2Q6ZN18 517 aaPredicted RBP24.05■■□□□ 1.44
PEF1-208ENST00000496805 EIF4G3O43432 1585 aaKnown RBP24.04■■□□□ 1.44
PEF1-208ENST00000496805 IFT140Q96RY7 1462 aa23.98■■□□□ 1.43
PEF1-208ENST00000496805 TOP2AP11388 1531 aaKnown RBP23.84■■□□□ 1.41
PEF1-208ENST00000496805 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
PEF1-208ENST00000496805 RSF1Q96T23 1441 aaPredicted RBP23.84■■□□□ 1.41
PEF1-208ENST00000496805 TARBP1Q13395 1621 aaKnown RBP23.77■■□□□ 1.4
PEF1-208ENST00000496805 AQRO60306 1485 aaKnown RBP eCLIP23.74■■□□□ 1.39
PEF1-208ENST00000496805 CLASP1Q7Z460 1538 aa23.69■■□□□ 1.38
PEF1-208ENST00000496805 DNMBPQ6XZF7 1577 aa23.69■■□□□ 1.38
PEF1-208ENST00000496805 FBLN2P98095 1184 aa23.65■■□□□ 1.38
PEF1-208ENST00000496805 ABCC8Q09428 1581 aa23.56■■□□□ 1.36
PEF1-208ENST00000496805 POLA1P09884 1462 aaPredicted RBP23.54■■□□□ 1.36
PEF1-208ENST00000496805 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
PEF1-208ENST00000496805 SNAPC4Q5SXM2 1469 aa23.52■■□□□ 1.36
PEF1-208ENST00000496805 CCDC88BA6NC98 1476 aa23.51■■□□□ 1.35
PEF1-208ENST00000496805 RAD54L2Q9Y4B4 1467 aa23.48■■□□□ 1.35
PEF1-208ENST00000496805 GAPVD1Q14C86 1478 aa23.42■■□□□ 1.34
PEF1-208ENST00000496805 TDRD9Q8NDG6 1382 aaKnown RBP23.4■■□□□ 1.34
PEF1-208ENST00000496805 KIF13AQ9H1H9 1805 aa23.38■■□□□ 1.33
PEF1-208ENST00000496805 WDR97A6NE52 1622 aa23.35■■□□□ 1.33
PEF1-208ENST00000496805 MAGI1Q96QZ7 1491 aaPredicted RBP23.34■■□□□ 1.33
PEF1-208ENST00000496805 PBRM1Q86U86 1689 aa23.33■■□□□ 1.33
PEF1-208ENST00000496805 ERCC6L2Q5T890 1561 aa23.33■■□□□ 1.33
PEF1-208ENST00000496805 SOGA1O94964 1423 aa23.29■■□□□ 1.32
PEF1-208ENST00000496805 SYNJ2O15056 1496 aa23.29■■□□□ 1.32
PEF1-208ENST00000496805 CHMP7Q8WUX9 453 aaPredicted RBP23.28■■□□□ 1.32
PEF1-208ENST00000496805 FGD5Q6ZNL6 1462 aa23.26■■□□□ 1.31
PEF1-208ENST00000496805 ILDR1Q86SU0 546 aaPredicted RBP23.26■■□□□ 1.31
PEF1-208ENST00000496805 GRIN2BQ13224 1484 aa23.24■■□□□ 1.31
PEF1-208ENST00000496805 CUX1P39880 1505 aa23.13■■□□□ 1.29
PEF1-208ENST00000496805 CEP170Q5SW79 1584 aa23.12■■□□□ 1.29
PEF1-208ENST00000496805 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.29
PEF1-208ENST00000496805 SHROOM2Q13796 1616 aa23.05■■□□□ 1.28
PEF1-208ENST00000496805 KDM4FA0A1W2PPD8 638 aa23.02■■□□□ 1.28
PEF1-208ENST00000496805 GRIN2AQ12879 1464 aa22.99■■□□□ 1.27
PEF1-208ENST00000496805 ADAMTS12P58397 1594 aa22.97■■□□□ 1.27
PEF1-208ENST00000496805 KDM6BO15054 1643 aa22.95■■□□□ 1.26
PEF1-208ENST00000496805 DIP2BQ9P265 1576 aa22.94■■□□□ 1.26
PEF1-208ENST00000496805 NUP160Q12769 1436 aa22.93■■□□□ 1.26
PEF1-208ENST00000496805 TSPOAP1O95153 1857 aa22.92■■□□□ 1.26
PEF1-208ENST00000496805 ABCA10Q8WWZ4 1543 aa22.89■■□□□ 1.26
PEF1-208ENST00000496805 ABCC10Q5T3U5 1492 aa22.89■■□□□ 1.25
PEF1-208ENST00000496805 MAPKBP1O60336 1514 aa22.82■■□□□ 1.24
PEF1-208ENST00000496805 FAM69CQ0P6D2 419 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms