RNA–Protein interactions for RNA: ENST00000489243.5

KDM4C-209, Transcript of lysine demethylase 4C, humanhuman

TSL 2

Gene KDM4C, Length 1,439 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-209ENST00000489243 AEBP2Q6ZN18 517 aaPredicted RBP21.96■■□□□ 1.11
KDM4C-209ENST00000489243 CHIC1Q5VXU3 224 aa20.96■□□□□ 0.95
KDM4C-209ENST00000489243 SENP3Q9H4L4 574 aaPredicted RBP18.77■□□□□ 0.6
KDM4C-209ENST00000489243 PHF23Q9BUL5 403 aaPredicted RBP18.49■□□□□ 0.55
KDM4C-209ENST00000489243 FOXD1Q16676 465 aa17.44■□□□□ 0.38
KDM4C-209ENST00000489243 PLPPR3Q6T4P5 718 aa16.82■□□□□ 0.28
KDM4C-209ENST00000489243 PIAS4Q8N2W9 510 aaPredicted RBP16.38■□□□□ 0.21
KDM4C-209ENST00000489243 PPP6R1Q9UPN7 881 aa16.35■□□□□ 0.21
KDM4C-209ENST00000489243 MSH5O43196 834 aa16.34■□□□□ 0.21
KDM4C-209ENST00000489243 ADRA2BP18089 450 aa16.33■□□□□ 0.2
KDM4C-209ENST00000489243 POTEDQ86YR6 584 aa15.77■□□□□ 0.11
KDM4C-209ENST00000489243 SCAF1Q9H7N4 1312 aaKnown RBP14.98□□□□□ -0.01
KDM4C-209ENST00000489243 MAPK8IP2Q13387 824 aaPredicted RBP14.95□□□□□ -0.02
KDM4C-209ENST00000489243 DMRT2Q9Y5R5 561 aa14.88□□□□□ -0.03
KDM4C-209ENST00000489243 NISCHQ9Y2I1 1504 aa14.74□□□□□ -0.05
KDM4C-209ENST00000489243 PPP4R3CPQ6ZMV5 832 aa14.74□□□□□ -0.05
KDM4C-209ENST00000489243 CNKSR2Q8WXI2 1034 aa14.45□□□□□ -0.1
KDM4C-209ENST00000489243 HOXD11P31277 338 aaPredicted RBP14.35□□□□□ -0.11
KDM4C-209ENST00000489243 DCAF8L1A6NGE4 600 aa14.33□□□□□ -0.11
KDM4C-209ENST00000489243 RNF216Q9NWF9 866 aaPredicted RBP14.28□□□□□ -0.12
KDM4C-209ENST00000489243 NCBP3Q53F19 620 aaKnown RBP14.23□□□□□ -0.13
KDM4C-209ENST00000489243 NPM3O75607 178 aaKnown RBP13.99□□□□□ -0.17
KDM4C-209ENST00000489243 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
KDM4C-209ENST00000489243 RNF39Q9H2S5 420 aa13.92□□□□□ -0.18
KDM4C-209ENST00000489243 DNAJC5BQ9UF47 199 aa13.82□□□□□ -0.2
KDM4C-209ENST00000489243 KCNA4P22459 653 aa13.81□□□□□ -0.2
KDM4C-209ENST00000489243 C1QBPQ07021 282 aaKnown RBP13.73□□□□□ -0.21
KDM4C-209ENST00000489243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.73□□□□□ -0.211e-6■■□□□ 11.4
KDM4C-209ENST00000489243 U3KPZ7 1027 aaPredicted RBP13.42□□□□□ -0.26
KDM4C-209ENST00000489243 SLC4A2P04920 1241 aa13.3□□□□□ -0.28
KDM4C-209ENST00000489243 CAPN15O75808 1086 aa13.22□□□□□ -0.29
KDM4C-209ENST00000489243 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
KDM4C-209ENST00000489243 APLP2Q06481 763 aa13.12□□□□□ -0.31
KDM4C-209ENST00000489243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.11□□□□□ -0.31
KDM4C-209ENST00000489243 HNRNPUL2Q1KMD3 747 aaKnown RBP13.11□□□□□ -0.31
KDM4C-209ENST00000489243 ABCC9O60706 1549 aa13.08□□□□□ -0.31
KDM4C-209ENST00000489243 CCDC180Q9P1Z9 1646 aa13.08□□□□□ -0.32
KDM4C-209ENST00000489243 SLC4A1APQ9BWU0 796 aaKnown RBP13.07□□□□□ -0.32
KDM4C-209ENST00000489243 DSG3P32926 999 aa13.06□□□□□ -0.32
KDM4C-209ENST00000489243 SAMD1Q6SPF0 538 aaPredicted RBP13.03□□□□□ -0.32
KDM4C-209ENST00000489243 TRHP20396 242 aaPredicted RBP13.02□□□□□ -0.33
KDM4C-209ENST00000489243 ZNF219Q9P2Y4 722 aaPredicted RBP13.01□□□□□ -0.33
KDM4C-209ENST00000489243 MYCNP04198 464 aaPredicted RBP12.97□□□□□ -0.33
KDM4C-209ENST00000489243 ABCB7O75027 752 aa12.91□□□□□ -0.34
KDM4C-209ENST00000489243 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
KDM4C-209ENST00000489243 ZBTB22O15209 634 aa12.68□□□□□ -0.38
KDM4C-209ENST00000489243 POLA2Q14181 598 aa12.65□□□□□ -0.38
KDM4C-209ENST00000489243 ATF5Q9Y2D1 282 aaPredicted RBP12.62□□□□□ -0.39
KDM4C-209ENST00000489243 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.41
KDM4C-209ENST00000489243 DCAF8L2P0C7V8 631 aa12.49□□□□□ -0.41
KDM4C-209ENST00000489243 ATXN8OSP0DMR3 200 aa12.45□□□□□ -0.42
KDM4C-209ENST00000489243 ZBTB12Q9Y330 459 aaPredicted RBP12.45□□□□□ -0.42
KDM4C-209ENST00000489243 RB1CC1Q8TDY2 1594 aa12.41□□□□□ -0.42
KDM4C-209ENST00000489243 POTEHQ6S545 545 aa12.39□□□□□ -0.43
KDM4C-209ENST00000489243 NACADO15069 1562 aa12.34□□□□□ -0.43
KDM4C-209ENST00000489243 OSCARQ8IYS5 282 aa12.29□□□□□ -0.44
KDM4C-209ENST00000489243 ZCCHC6Q5VYS8 1495 aaKnown RBP12.27□□□□□ -0.44
KDM4C-209ENST00000489243 PABPN1Q86U42 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
KDM4C-209ENST00000489243 AKT1S1Q96B36 256 aa12.21□□□□□ -0.45
KDM4C-209ENST00000489243 FBLN2P98095 1184 aa12.19□□□□□ -0.46
KDM4C-209ENST00000489243 CHRDL2Q6WN34 429 aa12.18□□□□□ -0.46
KDM4C-209ENST00000489243 MYO15BQ96JP2 1530 aa12.17□□□□□ -0.46
KDM4C-209ENST00000489243 CSRNP3Q8WYN3 585 aa12.16□□□□□ -0.46
KDM4C-209ENST00000489243 UNC13AQ9UPW8 1703 aa12.14□□□□□ -0.47
KDM4C-209ENST00000489243 EHMT2Q96KQ7 1210 aa12.13□□□□□ -0.47
KDM4C-209ENST00000489243 DCAF1Q9Y4B6 1507 aa12.1□□□□□ -0.47
KDM4C-209ENST00000489243 SCRIBQ14160 1630 aa12.09□□□□□ -0.47
KDM4C-209ENST00000489243 REM2Q8IYK8 340 aaPredicted RBP12.09□□□□□ -0.47
KDM4C-209ENST00000489243 BICRAQ9NZM4 1560 aa12.08□□□□□ -0.48
KDM4C-209ENST00000489243 SPDYE2BA6NHP3 402 aa12.05□□□□□ -0.48
KDM4C-209ENST00000489243 SPDYE6P0CI01 402 aa12.05□□□□□ -0.48
KDM4C-209ENST00000489243 SPDYE2Q495Y8 402 aa12.05□□□□□ -0.48
KDM4C-209ENST00000489243 MKRN4PQ13434 485 aaPredicted RBP12.03□□□□□ -0.48
KDM4C-209ENST00000489243 PITPNM1O00562 1244 aa11.98□□□□□ -0.49
KDM4C-209ENST00000489243 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
KDM4C-209ENST00000489243 PIP4P2Q8N4L2 257 aa11.9□□□□□ -0.5
KDM4C-209ENST00000489243 SSUH2Q9Y2M2 353 aa11.88□□□□□ -0.51
KDM4C-209ENST00000489243 FXR2P51116 673 aaKnown RBP eCLIP11.83□□□□□ -0.526e-6■■■■□ 25.8
KDM4C-209ENST00000489243 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
KDM4C-209ENST00000489243 SHROOM4Q9ULL8 1493 aa11.82□□□□□ -0.52
KDM4C-209ENST00000489243 CLEC11AQ9Y240 323 aa11.81□□□□□ -0.52
KDM4C-209ENST00000489243 EIF4G1Q04637 1599 aaKnown RBP11.77□□□□□ -0.53
KDM4C-209ENST00000489243 CC2D2AQ9P2K1 1620 aa11.77□□□□□ -0.53
KDM4C-209ENST00000489243 CECR2Q9BXF3 1484 aa11.73□□□□□ -0.53
KDM4C-209ENST00000489243 HAX1O00165 279 aa11.68□□□□□ -0.54
KDM4C-209ENST00000489243 PRKAR2AP13861 404 aaKnown RBP11.68□□□□□ -0.54
KDM4C-209ENST00000489243 SP7Q8TDD2 431 aaPredicted RBP11.67□□□□□ -0.54
KDM4C-209ENST00000489243 PRR29P0C7W0 189 aa11.61□□□□□ -0.55
KDM4C-209ENST00000489243 SPDYE4A6NLX3 237 aa11.56□□□□□ -0.56
KDM4C-209ENST00000489243 CHADLQ6NUI6 762 aa11.56□□□□□ -0.56
KDM4C-209ENST00000489243 SMARCA4P51532 1647 aa11.47□□□□□ -0.57
KDM4C-209ENST00000489243 EVX2Q03828 476 aa11.47□□□□□ -0.57
KDM4C-209ENST00000489243 ATAD2BQ9ULI0 1458 aa11.45□□□□□ -0.58
KDM4C-209ENST00000489243 C19orf67A6NJJ6 358 aa11.44□□□□□ -0.58
KDM4C-209ENST00000489243 STAG3Q9UJ98 1225 aa11.44□□□□□ -0.58
KDM4C-209ENST00000489243 MROH2BQ7Z745 1585 aa11.42□□□□□ -0.58
KDM4C-209ENST00000489243 BAZ1AQ9NRL2 1556 aaPredicted RBP11.42□□□□□ -0.58
KDM4C-209ENST00000489243 NCAPD3P42695 1498 aa11.41□□□□□ -0.58
KDM4C-209ENST00000489243 FARP1Q9Y4F1 1045 aaPredicted RBP11.38□□□□□ -0.59
KDM4C-209ENST00000489243 SMARCA2P51531 1590 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms