RNA–Protein interactions for RNA: ENST00000472443.1

PEF1-204, Transcript of penta-EF-hand domain containing 1, humanhuman

TSL 3

Gene PEF1, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-204ENST00000472443 NISCHQ9Y2I1 1504 aa38.5■■■■□ 3.75
PEF1-204ENST00000472443 CCDC180Q9P1Z9 1646 aa34.44■■■■□ 3.1
PEF1-204ENST00000472443 ABCC9O60706 1549 aa34.25■■■■□ 3.07
PEF1-204ENST00000472443 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.82
PEF1-204ENST00000472443 NACADO15069 1562 aa32.53■■■□□ 2.8
PEF1-204ENST00000472443 DCAF8L2P0C7V8 631 aa32.36■■■□□ 2.77
PEF1-204ENST00000472443 MYO15BQ96JP2 1530 aa32.19■■■□□ 2.74
PEF1-204ENST00000472443 ZCCHC6Q5VYS8 1495 aaKnown RBP31.97■■■□□ 2.71
PEF1-204ENST00000472443 DNAJC5BQ9UF47 199 aa31.93■■■□□ 2.7
PEF1-204ENST00000472443 PABPN1Q86U42 306 aaKnown RBP eCLIP31.92■■■□□ 2.7
PEF1-204ENST00000472443 UNC13AQ9UPW8 1703 aa31.89■■■□□ 2.7
PEF1-204ENST00000472443 DCAF1Q9Y4B6 1507 aa31.84■■■□□ 2.69
PEF1-204ENST00000472443 BICRAQ9NZM4 1560 aa31.73■■■□□ 2.67
PEF1-204ENST00000472443 SCRIBQ14160 1630 aa31.4■■■□□ 2.62
PEF1-204ENST00000472443 SHROOM4Q9ULL8 1493 aa31.39■■■□□ 2.62
PEF1-204ENST00000472443 EIF4G1Q04637 1599 aaKnown RBP30.95■■■□□ 2.54
PEF1-204ENST00000472443 CC2D2AQ9P2K1 1620 aa30.94■■■□□ 2.54
PEF1-204ENST00000472443 CECR2Q9BXF3 1484 aa30.84■■■□□ 2.53
PEF1-204ENST00000472443 NCAPD3P42695 1498 aa30.05■■■□□ 2.4
PEF1-204ENST00000472443 SMARCA4P51532 1647 aa29.98■■■□□ 2.39
PEF1-204ENST00000472443 ATAD2BQ9ULI0 1458 aa29.98■■■□□ 2.39
PEF1-204ENST00000472443 SMARCA2P51531 1590 aa29.91■■■□□ 2.38
PEF1-204ENST00000472443 BAZ1AQ9NRL2 1556 aaPredicted RBP29.87■■■□□ 2.37
PEF1-204ENST00000472443 HMGXB3Q12766 1538 aa29.84■■■□□ 2.37
PEF1-204ENST00000472443 PEG3Q9GZU2 1588 aa29.71■■■□□ 2.35
PEF1-204ENST00000472443 BAZ1BQ9UIG0 1483 aaKnown RBP29.7■■■□□ 2.35
PEF1-204ENST00000472443 MROH2BQ7Z745 1585 aa29.66■■■□□ 2.34
PEF1-204ENST00000472443 ERCC6Q03468 1493 aa29.57■■■□□ 2.32
PEF1-204ENST00000472443 NESP48681 1621 aa29.48■■■□□ 2.31
PEF1-204ENST00000472443 CUX2O14529 1486 aa29.47■■■□□ 2.31
PEF1-204ENST00000472443 LAMC3Q9Y6N6 1575 aa29.32■■■□□ 2.28
PEF1-204ENST00000472443 WIZO95785 1651 aa29.28■■■□□ 2.28
PEF1-204ENST00000472443 DNAJC5Q9H3Z4 198 aa29.19■■■□□ 2.26
PEF1-204ENST00000472443 PDS5BQ9NTI5 1447 aa29.16■■■□□ 2.26
PEF1-204ENST00000472443 THOC2Q8NI27 1593 aaKnown RBP29.14■■■□□ 2.26
PEF1-204ENST00000472443 RSF1Q96T23 1441 aaPredicted RBP29.14■■■□□ 2.26
PEF1-204ENST00000472443 CADPSQ9ULU8 1353 aa29.13■■■□□ 2.25
PEF1-204ENST00000472443 KIF21AQ7Z4S6 1674 aa29.07■■■□□ 2.24
PEF1-204ENST00000472443 TOP2AP11388 1531 aaKnown RBP28.98■■■□□ 2.23
PEF1-204ENST00000472443 MRC2Q9UBG0 1479 aa28.9■■■□□ 2.22
PEF1-204ENST00000472443 CFTRP13569 1480 aa28.85■■■□□ 2.21
PEF1-204ENST00000472443 CEP164Q9UPV0 1460 aa28.82■■■□□ 2.2
PEF1-204ENST00000472443 WDR62O43379 1518 aa28.82■■■□□ 2.2
PEF1-204ENST00000472443 FANCD2Q9BXW9 1451 aa28.8■■■□□ 2.2
PEF1-204ENST00000472443 CCDC88BA6NC98 1476 aa28.63■■■□□ 2.17
PEF1-204ENST00000472443 URB2Q14146 1524 aaKnown RBP28.55■■■□□ 2.16
PEF1-204ENST00000472443 PRDM2Q13029 1718 aa28.52■■■□□ 2.16
PEF1-204ENST00000472443 TOPBP1Q92547 1522 aa28.28■■■□□ 2.12
PEF1-204ENST00000472443 IFT140Q96RY7 1462 aa28.25■■■□□ 2.11
PEF1-204ENST00000472443 ABCC8Q09428 1581 aa28.24■■■□□ 2.11
PEF1-204ENST00000472443 DNMBPQ6XZF7 1577 aa28.2■■■□□ 2.1
PEF1-204ENST00000472443 ZNF608Q9ULD9 1512 aaPredicted RBP28.16■■■□□ 2.1
PEF1-204ENST00000472443 OSCARQ8IYS5 282 aa28.13■■■□□ 2.09
PEF1-204ENST00000472443 EIF4G3O43432 1585 aaKnown RBP28.01■■■□□ 2.07
PEF1-204ENST00000472443 POLA1P09884 1462 aaPredicted RBP28.01■■■□□ 2.07
PEF1-204ENST00000472443 TARBP1Q13395 1621 aaKnown RBP28■■■□□ 2.07
PEF1-204ENST00000472443 TRIM41Q8WV44 630 aa27.97■■■□□ 2.07
PEF1-204ENST00000472443 SUPT5HO00267 1087 aaKnown RBP27.96■■■□□ 2.07
PEF1-204ENST00000472443 AQRO60306 1485 aaKnown RBP eCLIP27.92■■■□□ 2.06
PEF1-204ENST00000472443 RAD54L2Q9Y4B4 1467 aa27.88■■■□□ 2.05
PEF1-204ENST00000472443 SOGA1O94964 1423 aa27.87■■■□□ 2.05
PEF1-204ENST00000472443 CUX1P39880 1505 aa27.87■■■□□ 2.05
PEF1-204ENST00000472443 FGD5Q6ZNL6 1462 aa27.85■■■□□ 2.05
PEF1-204ENST00000472443 TDRD9Q8NDG6 1382 aaKnown RBP27.79■■■□□ 2.04
PEF1-204ENST00000472443 WDR97A6NE52 1622 aa27.76■■■□□ 2.03
PEF1-204ENST00000472443 RIMBP3CA6NJZ7 1639 aa27.73■■■□□ 2.03
PEF1-204ENST00000472443 RIMBP3BA6NNM3 1639 aa27.73■■■□□ 2.03
PEF1-204ENST00000472443 RIMBP3Q9UFD9 1639 aa27.73■■■□□ 2.03
PEF1-204ENST00000472443 CHD1O14646 1710 aa27.72■■■□□ 2.03
PEF1-204ENST00000472443 ARHGEF11O15085 1522 aa27.68■■■□□ 2.02
PEF1-204ENST00000472443 FBLN2P98095 1184 aa27.68■■■□□ 2.02
PEF1-204ENST00000472443 SNAPC4Q5SXM2 1469 aa27.66■■■□□ 2.02
PEF1-204ENST00000472443 GRIN2BQ13224 1484 aa27.63■■■□□ 2.01
PEF1-204ENST00000472443 MAGI1Q96QZ7 1491 aaPredicted RBP27.61■■■□□ 2.01
PEF1-204ENST00000472443 ABCA10Q8WWZ4 1543 aa27.57■■■□□ 2
PEF1-204ENST00000472443 GAPVD1Q14C86 1478 aa27.55■■■□□ 2
PEF1-204ENST00000472443 CHMP7Q8WUX9 453 aaPredicted RBP27.53■■■□□ 2
PEF1-204ENST00000472443 SYNJ2O15056 1496 aa27.51■■■□□ 2
PEF1-204ENST00000472443 WRNQ14191 1432 aaPredicted RBP eCLIP27.5■■□□□ 1.99
PEF1-204ENST00000472443 ABCA5Q8WWZ7 1642 aa27.49■■□□□ 1.99
PEF1-204ENST00000472443 PBRM1Q86U86 1689 aa27.48■■□□□ 1.99
PEF1-204ENST00000472443 TOP2BQ02880 1626 aa27.47■■□□□ 1.99
PEF1-204ENST00000472443 CLASP1Q7Z460 1538 aa27.46■■□□□ 1.99
PEF1-204ENST00000472443 SYNJ1O43426 1573 aa27.46■■□□□ 1.99
PEF1-204ENST00000472443 BIVM-ERCC5R4GMW8 1640 aa27.45■■□□□ 1.99
PEF1-204ENST00000472443 CYB5RLQ6IPT4 315 aa27.45■■□□□ 1.98
PEF1-204ENST00000472443 ARAP1Q96P48 1450 aa27.44■■□□□ 1.98
PEF1-204ENST00000472443 ADAMTS12P58397 1594 aa27.27■■□□□ 1.96
PEF1-204ENST00000472443 GRIN2AQ12879 1464 aa27.26■■□□□ 1.95
PEF1-204ENST00000472443 FHAD1B1AJZ9 1412 aa27.22■■□□□ 1.95
PEF1-204ENST00000472443 ERICH3Q5RHP9 1530 aa27.21■■□□□ 1.95
PEF1-204ENST00000472443 NUP160Q12769 1436 aa27.18■■□□□ 1.94
PEF1-204ENST00000472443 CEP170Q5SW79 1584 aa27.14■■□□□ 1.94
PEF1-204ENST00000472443 TRHP20396 242 aaPredicted RBP27.07■■□□□ 1.92
PEF1-204ENST00000472443 ERCC6L2Q5T890 1561 aa27.03■■□□□ 1.92
PEF1-204ENST00000472443 SHROOM2Q13796 1616 aa27.01■■□□□ 1.91
PEF1-204ENST00000472443 KIF27Q86VH2 1401 aa26.96■■□□□ 1.91
PEF1-204ENST00000472443 IGF1RP08069 1367 aa26.92■■□□□ 1.9
PEF1-204ENST00000472443 RUSC2Q8N2Y8 1516 aa26.88■■□□□ 1.89
PEF1-204ENST00000472443 PRG4Q92954 1404 aaPredicted RBP26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms