RNA–Protein interactions for RNA: ENST00000478502.5

PEF1-205, Transcript of penta-EF-hand domain containing 1, humanhuman

TSL 2

Gene PEF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEF1-205ENST00000478502 NISCHQ9Y2I1 1504 aa27.17■■□□□ 1.94
PEF1-205ENST00000478502 ABCC9O60706 1549 aa25.09■■□□□ 1.61
PEF1-205ENST00000478502 CCDC180Q9P1Z9 1646 aa24.53■■□□□ 1.52
PEF1-205ENST00000478502 DNAJC5BQ9UF47 199 aa23.93■■□□□ 1.42
PEF1-205ENST00000478502 RB1CC1Q8TDY2 1594 aa23.63■■□□□ 1.37
PEF1-205ENST00000478502 NACADO15069 1562 aa23.35■■□□□ 1.33
PEF1-205ENST00000478502 PABPN1Q86U42 306 aaKnown RBP eCLIP23.29■■□□□ 1.32
PEF1-205ENST00000478502 DCAF8L2P0C7V8 631 aa23.21■■□□□ 1.31
PEF1-205ENST00000478502 UNC13AQ9UPW8 1703 aa22.97■■□□□ 1.27
PEF1-205ENST00000478502 BICRAQ9NZM4 1560 aa22.93■■□□□ 1.26
PEF1-205ENST00000478502 MYO15BQ96JP2 1530 aa22.87■■□□□ 1.25
PEF1-205ENST00000478502 CECR2Q9BXF3 1484 aa22.65■■□□□ 1.22
PEF1-205ENST00000478502 SHROOM4Q9ULL8 1493 aa22.62■■□□□ 1.21
PEF1-205ENST00000478502 CC2D2AQ9P2K1 1620 aa22.59■■□□□ 1.21
PEF1-205ENST00000478502 EIF4G1Q04637 1599 aaKnown RBP22.44■■□□□ 1.18
PEF1-205ENST00000478502 ZCCHC6Q5VYS8 1495 aaKnown RBP22.43■■□□□ 1.18
PEF1-205ENST00000478502 DCAF1Q9Y4B6 1507 aa22.41■■□□□ 1.18
PEF1-205ENST00000478502 SCRIBQ14160 1630 aa22.39■■□□□ 1.17
PEF1-205ENST00000478502 DNAJC5Q9H3Z4 198 aa22.34■■□□□ 1.17
PEF1-205ENST00000478502 CUX2O14529 1486 aa21.81■■□□□ 1.08
PEF1-205ENST00000478502 ERCC6Q03468 1493 aa21.72■■□□□ 1.07
PEF1-205ENST00000478502 NCAPD3P42695 1498 aa21.58■■□□□ 1.05
PEF1-205ENST00000478502 ATAD2BQ9ULI0 1458 aa21.46■■□□□ 1.03
PEF1-205ENST00000478502 NESP48681 1621 aa21.39■■□□□ 1.01
PEF1-205ENST00000478502 HMGXB3Q12766 1538 aa21.37■■□□□ 1.01
PEF1-205ENST00000478502 SMARCA2P51531 1590 aa21.36■■□□□ 1.01
PEF1-205ENST00000478502 SMARCA4P51532 1647 aa21.28■■□□□ 1
PEF1-205ENST00000478502 THOC2Q8NI27 1593 aaKnown RBP21.24■□□□□ 0.99
PEF1-205ENST00000478502 BAZ1BQ9UIG0 1483 aaKnown RBP21.24■□□□□ 0.99
PEF1-205ENST00000478502 TRIM41Q8WV44 630 aa21.21■□□□□ 0.99
PEF1-205ENST00000478502 LAMC3Q9Y6N6 1575 aa21.15■□□□□ 0.98
PEF1-205ENST00000478502 BAZ1AQ9NRL2 1556 aaPredicted RBP21.13■□□□□ 0.97
PEF1-205ENST00000478502 PDS5BQ9NTI5 1447 aa21.1■□□□□ 0.97
PEF1-205ENST00000478502 PEG3Q9GZU2 1588 aa21.06■□□□□ 0.96
PEF1-205ENST00000478502 KIF21AQ7Z4S6 1674 aa21.03■□□□□ 0.96
PEF1-205ENST00000478502 MRC2Q9UBG0 1479 aa20.94■□□□□ 0.94
PEF1-205ENST00000478502 MROH2BQ7Z745 1585 aa20.93■□□□□ 0.94
PEF1-205ENST00000478502 CADPSQ9ULU8 1353 aa20.92■□□□□ 0.94
PEF1-205ENST00000478502 WDR62O43379 1518 aa20.87■□□□□ 0.93
PEF1-205ENST00000478502 CEP164Q9UPV0 1460 aa20.76■□□□□ 0.91
PEF1-205ENST00000478502 OSCARQ8IYS5 282 aa20.75■□□□□ 0.91
PEF1-205ENST00000478502 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
PEF1-205ENST00000478502 WIZO95785 1651 aa20.62■□□□□ 0.89
PEF1-205ENST00000478502 CFTRP13569 1480 aa20.57■□□□□ 0.88
PEF1-205ENST00000478502 URB2Q14146 1524 aaKnown RBP20.53■□□□□ 0.88
PEF1-205ENST00000478502 RIMBP3CA6NJZ7 1639 aa20.48■□□□□ 0.87
PEF1-205ENST00000478502 RIMBP3BA6NNM3 1639 aa20.48■□□□□ 0.87
PEF1-205ENST00000478502 RIMBP3Q9UFD9 1639 aa20.48■□□□□ 0.87
PEF1-205ENST00000478502 ARHGEF11O15085 1522 aa20.4■□□□□ 0.86
PEF1-205ENST00000478502 TOP2AP11388 1531 aaKnown RBP20.37■□□□□ 0.85
PEF1-205ENST00000478502 ZNF608Q9ULD9 1512 aaPredicted RBP20.37■□□□□ 0.85
PEF1-205ENST00000478502 IFT140Q96RY7 1462 aa20.36■□□□□ 0.85
PEF1-205ENST00000478502 RSF1Q96T23 1441 aaPredicted RBP20.35■□□□□ 0.85
PEF1-205ENST00000478502 CYB5RLQ6IPT4 315 aa20.31■□□□□ 0.84
PEF1-205ENST00000478502 TRHP20396 242 aaPredicted RBP20.26■□□□□ 0.83
PEF1-205ENST00000478502 TOPBP1Q92547 1522 aa20.23■□□□□ 0.83
PEF1-205ENST00000478502 PRDM2Q13029 1718 aa20.21■□□□□ 0.83
PEF1-205ENST00000478502 EIF4G3O43432 1585 aaKnown RBP20.2■□□□□ 0.82
PEF1-205ENST00000478502 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
PEF1-205ENST00000478502 ABCC8Q09428 1581 aa20.16■□□□□ 0.82
PEF1-205ENST00000478502 CCDC88BA6NC98 1476 aa20.14■□□□□ 0.81
PEF1-205ENST00000478502 FBLN2P98095 1184 aa20.13■□□□□ 0.81
PEF1-205ENST00000478502 AQRO60306 1485 aaKnown RBP eCLIP20.12■□□□□ 0.811e-7■■■■■ 29.4
PEF1-205ENST00000478502 DNMBPQ6XZF7 1577 aa20.1■□□□□ 0.81
PEF1-205ENST00000478502 CHD1O14646 1710 aa20.09■□□□□ 0.81
PEF1-205ENST00000478502 TARBP1Q13395 1621 aaKnown RBP20.04■□□□□ 0.8
PEF1-205ENST00000478502 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
PEF1-205ENST00000478502 POLA1P09884 1462 aaPredicted RBP20■□□□□ 0.79
PEF1-205ENST00000478502 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.78
PEF1-205ENST00000478502 RAD54L2Q9Y4B4 1467 aa19.93■□□□□ 0.78
PEF1-205ENST00000478502 SNAPC4Q5SXM2 1469 aa19.92■□□□□ 0.78
PEF1-205ENST00000478502 SOGA1O94964 1423 aa19.91■□□□□ 0.78
PEF1-205ENST00000478502 CLASP1Q7Z460 1538 aa19.9■□□□□ 0.78
PEF1-205ENST00000478502 CHMP7Q8WUX9 453 aaPredicted RBP19.89■□□□□ 0.77
PEF1-205ENST00000478502 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
PEF1-205ENST00000478502 MAGI1Q96QZ7 1491 aaPredicted RBP19.84■□□□□ 0.77
PEF1-205ENST00000478502 WDR97A6NE52 1622 aa19.82■□□□□ 0.76
PEF1-205ENST00000478502 FGD5Q6ZNL6 1462 aa19.8■□□□□ 0.76
PEF1-205ENST00000478502 GRIN2BQ13224 1484 aa19.79■□□□□ 0.76
PEF1-205ENST00000478502 SYNJ2O15056 1496 aa19.78■□□□□ 0.76
PEF1-205ENST00000478502 GAPVD1Q14C86 1478 aa19.76■□□□□ 0.75
PEF1-205ENST00000478502 CUX1P39880 1505 aa19.7■□□□□ 0.74
PEF1-205ENST00000478502 PBRM1Q86U86 1689 aa19.59■□□□□ 0.73
PEF1-205ENST00000478502 ERCC6L2Q5T890 1561 aa19.55■□□□□ 0.72
PEF1-205ENST00000478502 ABCA10Q8WWZ4 1543 aa19.55■□□□□ 0.72
PEF1-205ENST00000478502 ABCA5Q8WWZ7 1642 aa19.53■□□□□ 0.72
PEF1-205ENST00000478502 GRIN2AQ12879 1464 aa19.53■□□□□ 0.72
PEF1-205ENST00000478502 NUP160Q12769 1436 aa19.49■□□□□ 0.71
PEF1-205ENST00000478502 CEP170Q5SW79 1584 aa19.49■□□□□ 0.71
PEF1-205ENST00000478502 ADAMTS12P58397 1594 aa19.44■□□□□ 0.7
PEF1-205ENST00000478502 WRNQ14191 1432 aaPredicted RBP eCLIP19.41■□□□□ 0.7
PEF1-205ENST00000478502 FHAD1B1AJZ9 1412 aa19.4■□□□□ 0.7
PEF1-205ENST00000478502 SHROOM2Q13796 1616 aa19.4■□□□□ 0.7
PEF1-205ENST00000478502 KIF13AQ9H1H9 1805 aa19.35■□□□□ 0.69
PEF1-205ENST00000478502 PRG4Q92954 1404 aaPredicted RBP19.34■□□□□ 0.69
PEF1-205ENST00000478502 FAM69CQ0P6D2 419 aa19.33■□□□□ 0.68
PEF1-205ENST00000478502 JPH4Q96JJ6 628 aa19.3■□□□□ 0.68
PEF1-205ENST00000478502 ABCC10Q5T3U5 1492 aa19.29■□□□□ 0.68
PEF1-205ENST00000478502 NPM1P06748 294 aaKnown RBP eCLIP19.29■□□□□ 0.68
PEF1-205ENST00000478502 ERICH3Q5RHP9 1530 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms