Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC27.48■■□□□ 1.99
PCF11O94913 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC27.48■■□□□ 1.99
PCF11O94913 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCF11O94913 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
PCF11O94913 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC27.48■■□□□ 1.99
PCF11O94913 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PCF11O94913 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PCF11O94913 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCF11O94913 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC27.48■■□□□ 1.99
PCF11O94913 WDR53-203ENST00000429115 683 ntTSL 2 BASIC27.48■■□□□ 1.99
PCF11O94913 AC092865.6-201ENST00000642101 219 ntBASIC27.48■■□□□ 1.99
PCF11O94913 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC27.47■■□□□ 1.99
PCF11O94913 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC27.47■■□□□ 1.99
PCF11O94913 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
PCF11O94913 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PCF11O94913 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCF11O94913 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC27.47■■□□□ 1.99
PCF11O94913 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC27.47■■□□□ 1.99
PCF11O94913 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCF11O94913 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
PCF11O94913 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
PCF11O94913 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC27.47■■□□□ 1.99
PCF11O94913 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC27.47■■□□□ 1.99
PCF11O94913 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC27.47■■□□□ 1.99
PCF11O94913 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC27.47■■□□□ 1.99
PCF11O94913 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC27.47■■□□□ 1.99
PCF11O94913 AC011467.4-201ENST00000594891 528 ntBASIC27.47■■□□□ 1.99
PCF11O94913 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC27.47■■□□□ 1.99
PCF11O94913 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC27.47■■□□□ 1.99
PCF11O94913 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCF11O94913 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC27.47■■□□□ 1.99
PCF11O94913 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC27.47■■□□□ 1.99
PCF11O94913 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC27.47■■□□□ 1.99
PCF11O94913 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PCF11O94913 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC27.47■■□□□ 1.99
PCF11O94913 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC27.46■■□□□ 1.99
PCF11O94913 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC27.46■■□□□ 1.99
PCF11O94913 SPCS2P1-201ENST00000561636 679 ntBASIC27.46■■□□□ 1.99
PCF11O94913 MNT-208ENST00000575394 606 ntTSL 4 BASIC27.46■■□□□ 1.99
PCF11O94913 OR7E47P-204ENST00000575924 449 ntBASIC27.46■■□□□ 1.99
PCF11O94913 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC27.46■■□□□ 1.99
PCF11O94913 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PCF11O94913 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
PCF11O94913 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC27.46■■□□□ 1.99
PCF11O94913 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
PCF11O94913 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
PCF11O94913 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
PCF11O94913 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
PCF11O94913 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
PCF11O94913 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC27.45■■□□□ 1.99
PCF11O94913 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC27.45■■□□□ 1.99
PCF11O94913 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
PCF11O94913 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC27.45■■□□□ 1.99
PCF11O94913 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
PCF11O94913 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
PCF11O94913 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
PCF11O94913 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
PCF11O94913 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
PCF11O94913 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
PCF11O94913 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC27.45■■□□□ 1.99
PCF11O94913 YBX1P5-201ENST00000509441 847 ntBASIC27.45■■□□□ 1.99
PCF11O94913 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC27.45■■□□□ 1.99
PCF11O94913 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
PCF11O94913 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC27.45■■□□□ 1.98
PCF11O94913 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC27.45■■□□□ 1.98
PCF11O94913 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
PCF11O94913 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
PCF11O94913 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
PCF11O94913 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC27.45■■□□□ 1.98
PCF11O94913 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC27.45■■□□□ 1.98
PCF11O94913 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
PCF11O94913 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC27.45■■□□□ 1.98
PCF11O94913 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
PCF11O94913 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC27.45■■□□□ 1.98
PCF11O94913 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PCF11O94913 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC27.44■■□□□ 1.98
PCF11O94913 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC27.44■■□□□ 1.98
PCF11O94913 MRPL20P1-201ENST00000400819 433 ntBASIC27.44■■□□□ 1.98
PCF11O94913 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCF11O94913 MCCD1P2-201ENST00000423228 335 ntBASIC27.44■■□□□ 1.98
PCF11O94913 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC27.44■■□□□ 1.98
PCF11O94913 IGHV3-52-201ENST00000519770 353 ntBASIC27.44■■□□□ 1.98
PCF11O94913 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC27.44■■□□□ 1.98
PCF11O94913 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PCF11O94913 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC27.44■■□□□ 1.98
PCF11O94913 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
PCF11O94913 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC27.44■■□□□ 1.98
PCF11O94913 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC27.44■■□□□ 1.98
PCF11O94913 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
PCF11O94913 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PCF11O94913 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC27.44■■□□□ 1.98
PCF11O94913 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
PCF11O94913 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCF11O94913 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
PCF11O94913 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC27.43■■□□□ 1.98
PCF11O94913 AP002414.1-201ENST00000391405 1147 ntBASIC27.43■■□□□ 1.98
PCF11O94913 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC27.43■■□□□ 1.98
PCF11O94913 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC27.43■■□□□ 1.98
PCF11O94913 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC27.43■■□□□ 1.98
PCF11O94913 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC27.43■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms