Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 AC018470.1-201ENST00000624790 3129 ntBASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 MIR574-201ENST00000385209 96 ntBASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 PMS2P1-201ENST00000431037 1228 ntBASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 SART3-203ENST00000546611 1184 ntBASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 AC139887.3-201ENST00000568585 713 ntBASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
ATXN3LQ9H3M9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 FAM220CP-201ENST00000395253 831 ntBASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 AL356309.3-201ENST00000624132 1934 ntBASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATXN3LQ9H3M9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 PHGDH-209ENST00000641074 1780 ntBASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 AC135050.7-201ENST00000624508 2218 ntBASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 AC007967.3-201ENST00000434308 558 ntBASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 AC097374.2-201ENST00000618617 1306 ntBASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 AC135776.1-201ENST00000319817 2481 ntBASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATXN3LQ9H3M9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
ATXN3LQ9H3M9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATXN3LQ9H3M9 BICD1-207ENST00000551848 1962 ntBASIC18.64■□□□□ 0.58
ATXN3LQ9H3M9 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC18.64■□□□□ 0.58
ATXN3LQ9H3M9 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ATXN3LQ9H3M9 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ATXN3LQ9H3M9 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ATXN3LQ9H3M9 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.64■□□□□ 0.57
ATXN3LQ9H3M9 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATXN3LQ9H3M9 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.64■□□□□ 0.57
ATXN3LQ9H3M9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms