Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 NUS1P1-201ENST00000446295 882 ntBASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 NSUN5P1-202ENST00000421140 1535 ntBASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 NSUN5P2-203ENST00000457352 1529 ntBASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.51■□□□□ 0.39
CCM2Q9BSQ5 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 FZD10-202ENST00000539839 3282 ntBASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 AC009533.2-201ENST00000543664 586 ntBASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 NOC2LP2-201ENST00000407594 1944 ntBASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.5■□□□□ 0.39
CCM2Q9BSQ5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 POM121L3P-201ENST00000419331 1163 ntBASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 AC006116.8-202ENST00000587620 1550 ntBASIC17.49■□□□□ 0.39
CCM2Q9BSQ5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CCM2Q9BSQ5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms