Protein–RNA interactions for Protein: P02655

APOC2, Apolipoprotein C-II, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC2P02655 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 LINC01311-201ENST00000565162 1445 ntBASIC18.32■□□□□ 0.52
APOC2P02655 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.32■□□□□ 0.52
APOC2P02655 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.32■□□□□ 0.52
APOC2P02655 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
APOC2P02655 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.32■□□□□ 0.52
APOC2P02655 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
APOC2P02655 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
APOC2P02655 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
APOC2P02655 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.32■□□□□ 0.52
APOC2P02655 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.32■□□□□ 0.52
APOC2P02655 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
APOC2P02655 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.31■□□□□ 0.52
APOC2P02655 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC2P02655 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.31■□□□□ 0.52
APOC2P02655 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC2P02655 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
APOC2P02655 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC2P02655 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APOC2P02655 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC2P02655 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.31■□□□□ 0.52
APOC2P02655 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.31■□□□□ 0.52
APOC2P02655 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APOC2P02655 AC005104.2-201ENST00000427818 678 ntBASIC18.31■□□□□ 0.52
APOC2P02655 AC063952.2-201ENST00000498792 1227 ntBASIC18.31■□□□□ 0.52
APOC2P02655 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC2P02655 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APOC2P02655 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC2P02655 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.31■□□□□ 0.52
APOC2P02655 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.31■□□□□ 0.52
APOC2P02655 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.31■□□□□ 0.52
APOC2P02655 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.31■□□□□ 0.52
APOC2P02655 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
APOC2P02655 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
APOC2P02655 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
APOC2P02655 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.31■□□□□ 0.52
APOC2P02655 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC2P02655 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
APOC2P02655 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
APOC2P02655 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
APOC2P02655 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
APOC2P02655 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOC2P02655 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APOC2P02655 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOC2P02655 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOC2P02655 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOC2P02655 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.3■□□□□ 0.52
APOC2P02655 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOC2P02655 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
APOC2P02655 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.3■□□□□ 0.52
APOC2P02655 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOC2P02655 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
APOC2P02655 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.3■□□□□ 0.52
APOC2P02655 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.3■□□□□ 0.52
APOC2P02655 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APOC2P02655 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APOC2P02655 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.3■□□□□ 0.52
APOC2P02655 SPDYE13P-201ENST00000445314 798 ntBASIC18.3■□□□□ 0.52
APOC2P02655 AC104076.2-201ENST00000448912 469 ntBASIC18.3■□□□□ 0.52
APOC2P02655 RNF126P1-202ENST00000569893 925 ntBASIC18.3■□□□□ 0.52
APOC2P02655 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.3■□□□□ 0.52
APOC2P02655 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.3■□□□□ 0.52
APOC2P02655 AC083849.1-201ENST00000615227 514 ntBASIC18.3■□□□□ 0.52
APOC2P02655 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
APOC2P02655 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APOC2P02655 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.3■□□□□ 0.52
APOC2P02655 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOC2P02655 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.3■□□□□ 0.52
APOC2P02655 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOC2P02655 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
APOC2P02655 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.3■□□□□ 0.52
APOC2P02655 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOC2P02655 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
APOC2P02655 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.3■□□□□ 0.52
APOC2P02655 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
APOC2P02655 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
APOC2P02655 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
APOC2P02655 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.29■□□□□ 0.52
APOC2P02655 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
APOC2P02655 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOC2P02655 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOC2P02655 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
APOC2P02655 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.29■□□□□ 0.52
APOC2P02655 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.29■□□□□ 0.52
APOC2P02655 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
APOC2P02655 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms