Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 FAM220CP-201ENST00000395253 831 ntBASIC12.7□□□□□ -0.38
LYRM9A8MSI8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 IGHV3-47-201ENST00000425060 335 ntBASIC12.7□□□□□ -0.38
LYRM9A8MSI8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 AC005336.2-201ENST00000593183 939 ntBASIC12.7□□□□□ -0.38
LYRM9A8MSI8 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
LYRM9A8MSI8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 MEG3-211ENST00000452514 461 ntTSL 3 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 PNN-202ENST00000553331 656 ntTSL 3 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 PRELID1P1-202ENST00000567272 903 ntBASIC12.69□□□□□ -0.38
LYRM9A8MSI8 LINC01711-201ENST00000598340 967 ntBASIC12.69□□□□□ -0.38
LYRM9A8MSI8 AC099336.1-202ENST00000602961 463 ntBASIC12.69□□□□□ -0.38
LYRM9A8MSI8 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 AL121772.3-201ENST00000610840 674 ntBASIC12.69□□□□□ -0.38
LYRM9A8MSI8 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LYRM9A8MSI8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms