Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
ARFGEF1Q9Y6D6 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
ARFGEF1Q9Y6D6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
ARFGEF1Q9Y6D6 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ARFGEF1Q9Y6D6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
ARFGEF1Q9Y6D6 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
ARFGEF1Q9Y6D6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
ARFGEF1Q9Y6D6 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
ARFGEF1Q9Y6D6 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC30.71■■■□□ 2.51
ARFGEF1Q9Y6D6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ARFGEF1Q9Y6D6 AC019171.1-201ENST00000601251 1056 ntBASIC30.7■■■□□ 2.51
ARFGEF1Q9Y6D6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
ARFGEF1Q9Y6D6 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC30.7■■■□□ 2.5
ARFGEF1Q9Y6D6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC30.7■■■□□ 2.5
ARFGEF1Q9Y6D6 AC018755.3-202ENST00000596210 929 ntBASIC30.68■■■□□ 2.5
ARFGEF1Q9Y6D6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC30.68■■■□□ 2.5
ARFGEF1Q9Y6D6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ARFGEF1Q9Y6D6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
ARFGEF1Q9Y6D6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.67■■■□□ 2.5
ARFGEF1Q9Y6D6 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC30.67■■■□□ 2.5
ARFGEF1Q9Y6D6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
ARFGEF1Q9Y6D6 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.66■■■□□ 2.5
ARFGEF1Q9Y6D6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.66■■■□□ 2.5
ARFGEF1Q9Y6D6 PEMT-206ENST00000435340 960 ntTSL 5 BASIC30.66■■■□□ 2.5
ARFGEF1Q9Y6D6 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
ARFGEF1Q9Y6D6 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
ARFGEF1Q9Y6D6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.64■■■□□ 2.5
ARFGEF1Q9Y6D6 KRT16P3-201ENST00000439127 1283 ntBASIC30.64■■■□□ 2.5
ARFGEF1Q9Y6D6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC30.64■■■□□ 2.5
ARFGEF1Q9Y6D6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.64■■■□□ 2.5
ARFGEF1Q9Y6D6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
ARFGEF1Q9Y6D6 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
ARFGEF1Q9Y6D6 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ARFGEF1Q9Y6D6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC30.63■■■□□ 2.49
ARFGEF1Q9Y6D6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ARFGEF1Q9Y6D6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
ARFGEF1Q9Y6D6 AC100797.4-201ENST00000631653 1827 ntBASIC30.62■■■□□ 2.49
ARFGEF1Q9Y6D6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC30.62■■■□□ 2.49
ARFGEF1Q9Y6D6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ARFGEF1Q9Y6D6 UNC93B8-201ENST00000511903 705 ntBASIC30.61■■■□□ 2.49
ARFGEF1Q9Y6D6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.61■■■□□ 2.49
ARFGEF1Q9Y6D6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.61■■■□□ 2.49
ARFGEF1Q9Y6D6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ARFGEF1Q9Y6D6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.61■■■□□ 2.49
ARFGEF1Q9Y6D6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.61■■■□□ 2.49
ARFGEF1Q9Y6D6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ARFGEF1Q9Y6D6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ARFGEF1Q9Y6D6 AC131281.2-201ENST00000520478 145 ntBASIC30.6■■■□□ 2.49
ARFGEF1Q9Y6D6 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC30.6■■■□□ 2.49
ARFGEF1Q9Y6D6 AP004833.2-201ENST00000532228 1454 ntBASIC30.6■■■□□ 2.49
ARFGEF1Q9Y6D6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ARFGEF1Q9Y6D6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC30.59■■■□□ 2.49
ARFGEF1Q9Y6D6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
ARFGEF1Q9Y6D6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.58■■■□□ 2.49
ARFGEF1Q9Y6D6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
ARFGEF1Q9Y6D6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC30.57■■■□□ 2.48
ARFGEF1Q9Y6D6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC30.57■■■□□ 2.48
ARFGEF1Q9Y6D6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
ARFGEF1Q9Y6D6 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
ARFGEF1Q9Y6D6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
ARFGEF1Q9Y6D6 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARFGEF1Q9Y6D6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC30.56■■■□□ 2.48
ARFGEF1Q9Y6D6 BX664725.1-201ENST00000438252 379 ntBASIC30.56■■■□□ 2.48
ARFGEF1Q9Y6D6 MIR4787-201ENST00000607364 84 ntBASIC30.56■■■□□ 2.48
ARFGEF1Q9Y6D6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.56■■■□□ 2.48
ARFGEF1Q9Y6D6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
ARFGEF1Q9Y6D6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC30.55■■■□□ 2.48
ARFGEF1Q9Y6D6 AC087393.1-201ENST00000582896 145 ntBASIC30.55■■■□□ 2.48
ARFGEF1Q9Y6D6 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC30.55■■■□□ 2.48
ARFGEF1Q9Y6D6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC30.55■■■□□ 2.48
ARFGEF1Q9Y6D6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
ARFGEF1Q9Y6D6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC30.54■■■□□ 2.48
ARFGEF1Q9Y6D6 LONRF2P2-201ENST00000439212 571 ntBASIC30.54■■■□□ 2.48
ARFGEF1Q9Y6D6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARFGEF1Q9Y6D6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC30.54■■■□□ 2.48
ARFGEF1Q9Y6D6 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
ARFGEF1Q9Y6D6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
ARFGEF1Q9Y6D6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
ARFGEF1Q9Y6D6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC30.53■■■□□ 2.48
ARFGEF1Q9Y6D6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC30.53■■■□□ 2.48
ARFGEF1Q9Y6D6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.52■■■□□ 2.48
ARFGEF1Q9Y6D6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC30.52■■■□□ 2.48
ARFGEF1Q9Y6D6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
ARFGEF1Q9Y6D6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
ARFGEF1Q9Y6D6 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC30.52■■■□□ 2.48
ARFGEF1Q9Y6D6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
ARFGEF1Q9Y6D6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC30.51■■■□□ 2.47
ARFGEF1Q9Y6D6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
ARFGEF1Q9Y6D6 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
ARFGEF1Q9Y6D6 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
ARFGEF1Q9Y6D6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC30.5■■■□□ 2.47
ARFGEF1Q9Y6D6 KRT125P-201ENST00000546827 989 ntBASIC30.5■■■□□ 2.47
ARFGEF1Q9Y6D6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
ARFGEF1Q9Y6D6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.5■■■□□ 2.47
ARFGEF1Q9Y6D6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
ARFGEF1Q9Y6D6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
ARFGEF1Q9Y6D6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
ARFGEF1Q9Y6D6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.49■■■□□ 2.47
ARFGEF1Q9Y6D6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC30.49■■■□□ 2.47
ARFGEF1Q9Y6D6 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms