Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
PCDHGA6Q9Y5G7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.36
PCDHGA6Q9Y5G7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGA6Q9Y5G7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGA6Q9Y5G7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.57■■□□□ 1.36
PCDHGA6Q9Y5G7 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDHGA6Q9Y5G7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA6Q9Y5G7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA6Q9Y5G7 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA6Q9Y5G7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDHGA6Q9Y5G7 GFER-205ENST00000569451 517 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHGA6Q9Y5G7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PCDHGA6Q9Y5G7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDHGA6Q9Y5G7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA6Q9Y5G7 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDHGA6Q9Y5G7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA6Q9Y5G7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA6Q9Y5G7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA6Q9Y5G7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA6Q9Y5G7 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.55■■□□□ 1.36
PCDHGA6Q9Y5G7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDHGA6Q9Y5G7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDHGA6Q9Y5G7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.54■■□□□ 1.36
PCDHGA6Q9Y5G7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHGA6Q9Y5G7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA6Q9Y5G7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA6Q9Y5G7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA6Q9Y5G7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA6Q9Y5G7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC23.54■■□□□ 1.36
PCDHGA6Q9Y5G7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDHGA6Q9Y5G7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDHGA6Q9Y5G7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.53■■□□□ 1.36
PCDHGA6Q9Y5G7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
PCDHGA6Q9Y5G7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA6Q9Y5G7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.53■■□□□ 1.36
PCDHGA6Q9Y5G7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PCDHGA6Q9Y5G7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC23.53■■□□□ 1.36
PCDHGA6Q9Y5G7 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA6Q9Y5G7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA6Q9Y5G7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA6Q9Y5G7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDHGA6Q9Y5G7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDHGA6Q9Y5G7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.51■■□□□ 1.35
PCDHGA6Q9Y5G7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA6Q9Y5G7 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.51■■□□□ 1.35
PCDHGA6Q9Y5G7 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGA6Q9Y5G7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDHGA6Q9Y5G7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDHGA6Q9Y5G7 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA6Q9Y5G7 AL359258.2-201ENST00000564063 1566 ntBASIC23.5■■□□□ 1.35
PCDHGA6Q9Y5G7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA6Q9Y5G7 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA6Q9Y5G7 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA6Q9Y5G7 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA6Q9Y5G7 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDHGA6Q9Y5G7 SMPD5-203ENST00000639008 1464 ntBASIC23.49■■□□□ 1.35
PCDHGA6Q9Y5G7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA6Q9Y5G7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA6Q9Y5G7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDHGA6Q9Y5G7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
PCDHGA6Q9Y5G7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PCDHGA6Q9Y5G7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA6Q9Y5G7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA6Q9Y5G7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
PCDHGA6Q9Y5G7 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.48■■□□□ 1.35
PCDHGA6Q9Y5G7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
PCDHGA6Q9Y5G7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.48■■□□□ 1.35
PCDHGA6Q9Y5G7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.47■■□□□ 1.35
PCDHGA6Q9Y5G7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.47■■□□□ 1.35
PCDHGA6Q9Y5G7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA6Q9Y5G7 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA6Q9Y5G7 AC009831.1-201ENST00000580420 1582 ntBASIC23.47■■□□□ 1.35
PCDHGA6Q9Y5G7 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA6Q9Y5G7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
PCDHGA6Q9Y5G7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA6Q9Y5G7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.47■■□□□ 1.35
PCDHGA6Q9Y5G7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
PCDHGA6Q9Y5G7 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGA6Q9Y5G7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGA6Q9Y5G7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
PCDHGA6Q9Y5G7 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
PCDHGA6Q9Y5G7 AC133552.2-201ENST00000619106 1032 ntBASIC23.46■■□□□ 1.35
PCDHGA6Q9Y5G7 AC129492.7-201ENST00000622992 756 ntBASIC23.46■■□□□ 1.35
PCDHGA6Q9Y5G7 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
PCDHGA6Q9Y5G7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA6Q9Y5G7 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA6Q9Y5G7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA6Q9Y5G7 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA6Q9Y5G7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA6Q9Y5G7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC23.45■■□□□ 1.34
PCDHGA6Q9Y5G7 AC025884.2-201ENST00000553429 711 ntBASIC23.45■■□□□ 1.34
PCDHGA6Q9Y5G7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDHGA6Q9Y5G7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.45■■□□□ 1.34
PCDHGA6Q9Y5G7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
PCDHGA6Q9Y5G7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA6Q9Y5G7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA6Q9Y5G7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
PCDHGA6Q9Y5G7 AL592293.1-201ENST00000502889 1188 ntBASIC23.44■■□□□ 1.34
PCDHGA6Q9Y5G7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.44■■□□□ 1.34
PCDHGA6Q9Y5G7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms