Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PCDHB7Q9Y5E2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC26.71■■□□□ 1.87
PCDHB7Q9Y5E2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHB7Q9Y5E2 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHB7Q9Y5E2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.71■■□□□ 1.87
PCDHB7Q9Y5E2 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHB7Q9Y5E2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHB7Q9Y5E2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHB7Q9Y5E2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC26.71■■□□□ 1.87
PCDHB7Q9Y5E2 YBX1P4-201ENST00000392794 808 ntBASIC26.71■■□□□ 1.87
PCDHB7Q9Y5E2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC26.71■■□□□ 1.87
PCDHB7Q9Y5E2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHB7Q9Y5E2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.71■■□□□ 1.87
PCDHB7Q9Y5E2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHB7Q9Y5E2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PCDHB7Q9Y5E2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHB7Q9Y5E2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.69■■□□□ 1.86
PCDHB7Q9Y5E2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PCDHB7Q9Y5E2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.69■■□□□ 1.86
PCDHB7Q9Y5E2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.69■■□□□ 1.86
PCDHB7Q9Y5E2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHB7Q9Y5E2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHB7Q9Y5E2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHB7Q9Y5E2 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.68■■□□□ 1.86
PCDHB7Q9Y5E2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.68■■□□□ 1.86
PCDHB7Q9Y5E2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.68■■□□□ 1.86
PCDHB7Q9Y5E2 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHB7Q9Y5E2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHB7Q9Y5E2 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PCDHB7Q9Y5E2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.68■■□□□ 1.86
PCDHB7Q9Y5E2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.67■■□□□ 1.86
PCDHB7Q9Y5E2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHB7Q9Y5E2 PVT1_1.1-201ENST00000615125 194 ntBASIC26.67■■□□□ 1.86
PCDHB7Q9Y5E2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHB7Q9Y5E2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PCDHB7Q9Y5E2 AC103834.1-201ENST00000520383 144 ntBASIC26.66■■□□□ 1.86
PCDHB7Q9Y5E2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PCDHB7Q9Y5E2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHB7Q9Y5E2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHB7Q9Y5E2 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PCDHB7Q9Y5E2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
PCDHB7Q9Y5E2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHB7Q9Y5E2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
PCDHB7Q9Y5E2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.64■■□□□ 1.86
PCDHB7Q9Y5E2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PCDHB7Q9Y5E2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
PCDHB7Q9Y5E2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.63■■□□□ 1.85
PCDHB7Q9Y5E2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.62■■□□□ 1.85
PCDHB7Q9Y5E2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC26.62■■□□□ 1.85
PCDHB7Q9Y5E2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC26.62■■□□□ 1.85
PCDHB7Q9Y5E2 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB7Q9Y5E2 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB7Q9Y5E2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.61■■□□□ 1.85
PCDHB7Q9Y5E2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PCDHB7Q9Y5E2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB7Q9Y5E2 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB7Q9Y5E2 AC009299.2-201ENST00000482477 511 ntBASIC26.6■■□□□ 1.85
PCDHB7Q9Y5E2 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
PCDHB7Q9Y5E2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHB7Q9Y5E2 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC26.59■■□□□ 1.85
PCDHB7Q9Y5E2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHB7Q9Y5E2 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.59■■□□□ 1.85
PCDHB7Q9Y5E2 MIR4508-201ENST00000584178 70 ntBASIC26.59■■□□□ 1.85
PCDHB7Q9Y5E2 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PCDHB7Q9Y5E2 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
PCDHB7Q9Y5E2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.59■■□□□ 1.85
PCDHB7Q9Y5E2 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB7Q9Y5E2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB7Q9Y5E2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC26.58■■□□□ 1.85
PCDHB7Q9Y5E2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
PCDHB7Q9Y5E2 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHB7Q9Y5E2 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHB7Q9Y5E2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHB7Q9Y5E2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHB7Q9Y5E2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHB7Q9Y5E2 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
PCDHB7Q9Y5E2 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.57■■□□□ 1.84
PCDHB7Q9Y5E2 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.57■■□□□ 1.84
PCDHB7Q9Y5E2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PCDHB7Q9Y5E2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC26.56■■□□□ 1.84
PCDHB7Q9Y5E2 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC26.56■■□□□ 1.84
PCDHB7Q9Y5E2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHB7Q9Y5E2 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHB7Q9Y5E2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PCDHB7Q9Y5E2 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.55■■□□□ 1.84
PCDHB7Q9Y5E2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
PCDHB7Q9Y5E2 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.55■■□□□ 1.84
PCDHB7Q9Y5E2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.54■■□□□ 1.84
PCDHB7Q9Y5E2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHB7Q9Y5E2 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
PCDHB7Q9Y5E2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.54■■□□□ 1.84
PCDHB7Q9Y5E2 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC26.53■■□□□ 1.84
PCDHB7Q9Y5E2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHB7Q9Y5E2 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHB7Q9Y5E2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.53■■□□□ 1.84
PCDHB7Q9Y5E2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
PCDHB7Q9Y5E2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
PCDHB7Q9Y5E2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHB7Q9Y5E2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
PCDHB7Q9Y5E2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms