Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.76■■■□□ 2.68
TFCP2L1Q9NZI6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
TFCP2L1Q9NZI6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC31.76■■■□□ 2.67
TFCP2L1Q9NZI6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.76■■■□□ 2.67
TFCP2L1Q9NZI6 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
TFCP2L1Q9NZI6 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC31.76■■■□□ 2.67
TFCP2L1Q9NZI6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC31.75■■■□□ 2.67
TFCP2L1Q9NZI6 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.75■■■□□ 2.67
TFCP2L1Q9NZI6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC31.74■■■□□ 2.67
TFCP2L1Q9NZI6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC31.73■■■□□ 2.67
TFCP2L1Q9NZI6 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
TFCP2L1Q9NZI6 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
TFCP2L1Q9NZI6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC31.73■■■□□ 2.67
TFCP2L1Q9NZI6 AC019171.1-201ENST00000601251 1056 ntBASIC31.73■■■□□ 2.67
TFCP2L1Q9NZI6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
TFCP2L1Q9NZI6 TK2-216ENST00000564917 1156 ntTSL 3 BASIC31.72■■■□□ 2.67
TFCP2L1Q9NZI6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC31.72■■■□□ 2.67
TFCP2L1Q9NZI6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC31.71■■■□□ 2.67
TFCP2L1Q9NZI6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.71■■■□□ 2.67
TFCP2L1Q9NZI6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC31.71■■■□□ 2.67
TFCP2L1Q9NZI6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
TFCP2L1Q9NZI6 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
TFCP2L1Q9NZI6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
TFCP2L1Q9NZI6 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC31.69■■■□□ 2.66
TFCP2L1Q9NZI6 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC31.69■■■□□ 2.66
TFCP2L1Q9NZI6 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC31.69■■■□□ 2.66
TFCP2L1Q9NZI6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31.69■■■□□ 2.66
TFCP2L1Q9NZI6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC31.69■■■□□ 2.66
TFCP2L1Q9NZI6 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC31.68■■■□□ 2.66
TFCP2L1Q9NZI6 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
TFCP2L1Q9NZI6 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
TFCP2L1Q9NZI6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC31.67■■■□□ 2.66
TFCP2L1Q9NZI6 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC31.67■■■□□ 2.66
TFCP2L1Q9NZI6 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
TFCP2L1Q9NZI6 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
TFCP2L1Q9NZI6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.65■■■□□ 2.66
TFCP2L1Q9NZI6 MIR638-201ENST00000385237 100 ntBASIC31.65■■■□□ 2.66
TFCP2L1Q9NZI6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.65■■■□□ 2.66
TFCP2L1Q9NZI6 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
TFCP2L1Q9NZI6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
TFCP2L1Q9NZI6 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
TFCP2L1Q9NZI6 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
TFCP2L1Q9NZI6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TFCP2L1Q9NZI6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC31.63■■■□□ 2.65
TFCP2L1Q9NZI6 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.63■■■□□ 2.65
TFCP2L1Q9NZI6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
TFCP2L1Q9NZI6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TFCP2L1Q9NZI6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TFCP2L1Q9NZI6 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC31.62■■■□□ 2.65
TFCP2L1Q9NZI6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TFCP2L1Q9NZI6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
TFCP2L1Q9NZI6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TFCP2L1Q9NZI6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
TFCP2L1Q9NZI6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
TFCP2L1Q9NZI6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
TFCP2L1Q9NZI6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TFCP2L1Q9NZI6 KRT125P-201ENST00000546827 989 ntBASIC31.6■■■□□ 2.65
TFCP2L1Q9NZI6 AC087393.1-201ENST00000582896 145 ntBASIC31.6■■■□□ 2.65
TFCP2L1Q9NZI6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC31.6■■■□□ 2.65
TFCP2L1Q9NZI6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
TFCP2L1Q9NZI6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC31.59■■■□□ 2.65
TFCP2L1Q9NZI6 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
TFCP2L1Q9NZI6 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC31.58■■■□□ 2.65
TFCP2L1Q9NZI6 MIR4787-201ENST00000607364 84 ntBASIC31.58■■■□□ 2.65
TFCP2L1Q9NZI6 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
TFCP2L1Q9NZI6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TFCP2L1Q9NZI6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TFCP2L1Q9NZI6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
TFCP2L1Q9NZI6 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
TFCP2L1Q9NZI6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC31.57■■■□□ 2.64
TFCP2L1Q9NZI6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TFCP2L1Q9NZI6 AL359504.2-201ENST00000605506 1601 ntBASIC31.57■■■□□ 2.64
TFCP2L1Q9NZI6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TFCP2L1Q9NZI6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
TFCP2L1Q9NZI6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC31.56■■■□□ 2.64
TFCP2L1Q9NZI6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC31.56■■■□□ 2.64
TFCP2L1Q9NZI6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC31.56■■■□□ 2.64
TFCP2L1Q9NZI6 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
TFCP2L1Q9NZI6 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.55■■■□□ 2.64
TFCP2L1Q9NZI6 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
TFCP2L1Q9NZI6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC31.55■■■□□ 2.64
TFCP2L1Q9NZI6 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
TFCP2L1Q9NZI6 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.55■■■□□ 2.64
TFCP2L1Q9NZI6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.55■■■□□ 2.64
TFCP2L1Q9NZI6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.54■■■□□ 2.64
TFCP2L1Q9NZI6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
TFCP2L1Q9NZI6 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC31.54■■■□□ 2.64
TFCP2L1Q9NZI6 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TFCP2L1Q9NZI6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC31.53■■■□□ 2.64
TFCP2L1Q9NZI6 LONRF2P2-201ENST00000439212 571 ntBASIC31.53■■■□□ 2.64
TFCP2L1Q9NZI6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TFCP2L1Q9NZI6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
TFCP2L1Q9NZI6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC31.52■■■□□ 2.64
TFCP2L1Q9NZI6 UNC93B8-201ENST00000511903 705 ntBASIC31.52■■■□□ 2.64
TFCP2L1Q9NZI6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC31.52■■■□□ 2.64
TFCP2L1Q9NZI6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
TFCP2L1Q9NZI6 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.64
TFCP2L1Q9NZI6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
TFCP2L1Q9NZI6 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC31.51■■■□□ 2.63
TFCP2L1Q9NZI6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC31.51■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms