Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MIR3648-2-201ENST00000581792 180 ntBASIC20.25■□□□□ 0.83
LIN7CQ9NUP9 MIR3648-1-201ENST00000615959 180 ntBASIC20.25■□□□□ 0.83
LIN7CQ9NUP9 CR559946.2-201ENST00000623684 991 ntBASIC20.25■□□□□ 0.83
LIN7CQ9NUP9 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.25■□□□□ 0.83
LIN7CQ9NUP9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
LIN7CQ9NUP9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LIN7CQ9NUP9 AC142472.1-201ENST00000612013 1741 ntBASIC20.24■□□□□ 0.83
LIN7CQ9NUP9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LIN7CQ9NUP9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
LIN7CQ9NUP9 AC110285.7-201ENST00000624417 1536 ntBASIC20.23■□□□□ 0.83
LIN7CQ9NUP9 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
LIN7CQ9NUP9 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIN7CQ9NUP9 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIN7CQ9NUP9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.23■□□□□ 0.83
LIN7CQ9NUP9 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.23■□□□□ 0.83
LIN7CQ9NUP9 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LIN7CQ9NUP9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN7CQ9NUP9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN7CQ9NUP9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
LIN7CQ9NUP9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
LIN7CQ9NUP9 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.22■□□□□ 0.83
LIN7CQ9NUP9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIN7CQ9NUP9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.21■□□□□ 0.83
LIN7CQ9NUP9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.21■□□□□ 0.83
LIN7CQ9NUP9 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
LIN7CQ9NUP9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.21■□□□□ 0.83
LIN7CQ9NUP9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LIN7CQ9NUP9 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
LIN7CQ9NUP9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.21■□□□□ 0.83
LIN7CQ9NUP9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
LIN7CQ9NUP9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIN7CQ9NUP9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LIN7CQ9NUP9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
LIN7CQ9NUP9 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC20.2■□□□□ 0.82
LIN7CQ9NUP9 AC016575.1-201ENST00000607026 382 ntBASIC20.2■□□□□ 0.82
LIN7CQ9NUP9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIN7CQ9NUP9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LIN7CQ9NUP9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LIN7CQ9NUP9 WHAMMP3-201ENST00000611636 1609 ntBASIC20.2■□□□□ 0.82
LIN7CQ9NUP9 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC20.19■□□□□ 0.82
LIN7CQ9NUP9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
LIN7CQ9NUP9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LIN7CQ9NUP9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LIN7CQ9NUP9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LIN7CQ9NUP9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LIN7CQ9NUP9 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.19■□□□□ 0.82
LIN7CQ9NUP9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.18■□□□□ 0.82
LIN7CQ9NUP9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LIN7CQ9NUP9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LIN7CQ9NUP9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LIN7CQ9NUP9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.18■□□□□ 0.82
LIN7CQ9NUP9 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LIN7CQ9NUP9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LIN7CQ9NUP9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LIN7CQ9NUP9 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LIN7CQ9NUP9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.17■□□□□ 0.82
LIN7CQ9NUP9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LIN7CQ9NUP9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LIN7CQ9NUP9 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.16■□□□□ 0.82
LIN7CQ9NUP9 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LIN7CQ9NUP9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.15■□□□□ 0.82
LIN7CQ9NUP9 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LIN7CQ9NUP9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
LIN7CQ9NUP9 HLA-V-202ENST00000446817 847 ntBASIC20.15■□□□□ 0.82
LIN7CQ9NUP9 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
LIN7CQ9NUP9 AC008813.1-201ENST00000536597 885 ntBASIC20.15■□□□□ 0.82
LIN7CQ9NUP9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.15■□□□□ 0.82
LIN7CQ9NUP9 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
LIN7CQ9NUP9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.15■□□□□ 0.82
LIN7CQ9NUP9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LIN7CQ9NUP9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LIN7CQ9NUP9 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
LIN7CQ9NUP9 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
LIN7CQ9NUP9 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
LIN7CQ9NUP9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LIN7CQ9NUP9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LIN7CQ9NUP9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LIN7CQ9NUP9 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
LIN7CQ9NUP9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
LIN7CQ9NUP9 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LIN7CQ9NUP9 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
LIN7CQ9NUP9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
LIN7CQ9NUP9 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LIN7CQ9NUP9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LIN7CQ9NUP9 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LIN7CQ9NUP9 MIR639-201ENST00000384974 98 ntBASIC20.13■□□□□ 0.81
LIN7CQ9NUP9 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.13■□□□□ 0.81
LIN7CQ9NUP9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LIN7CQ9NUP9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.13■□□□□ 0.81
LIN7CQ9NUP9 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LIN7CQ9NUP9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LIN7CQ9NUP9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LIN7CQ9NUP9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.12■□□□□ 0.81
LIN7CQ9NUP9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.12■□□□□ 0.81
LIN7CQ9NUP9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LIN7CQ9NUP9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LIN7CQ9NUP9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LIN7CQ9NUP9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.12■□□□□ 0.81
LIN7CQ9NUP9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LIN7CQ9NUP9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms