Protein–RNA interactions for Protein: Q9GZV3

SLC5A7, High affinity choline transporter 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A7Q9GZV3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
SLC5A7Q9GZV3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC20.5■□□□□ 0.87
SLC5A7Q9GZV3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SLC5A7Q9GZV3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC5A7Q9GZV3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC5A7Q9GZV3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC5A7Q9GZV3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC5A7Q9GZV3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SLC5A7Q9GZV3 DUSP8P4-201ENST00000399538 1761 ntBASIC20.49■□□□□ 0.87
SLC5A7Q9GZV3 MIR3665-201ENST00000578708 105 ntBASIC20.49■□□□□ 0.87
SLC5A7Q9GZV3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.49■□□□□ 0.87
SLC5A7Q9GZV3 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SLC5A7Q9GZV3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC5A7Q9GZV3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.48■□□□□ 0.87
SLC5A7Q9GZV3 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SLC5A7Q9GZV3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.48■□□□□ 0.87
SLC5A7Q9GZV3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
SLC5A7Q9GZV3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SLC5A7Q9GZV3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.47■□□□□ 0.87
SLC5A7Q9GZV3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC5A7Q9GZV3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC5A7Q9GZV3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.47■□□□□ 0.87
SLC5A7Q9GZV3 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SLC5A7Q9GZV3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SLC5A7Q9GZV3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SLC5A7Q9GZV3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC5A7Q9GZV3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC5A7Q9GZV3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC5A7Q9GZV3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.46■□□□□ 0.87
SLC5A7Q9GZV3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SLC5A7Q9GZV3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC5A7Q9GZV3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC5A7Q9GZV3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.45■□□□□ 0.86
SLC5A7Q9GZV3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.45■□□□□ 0.86
SLC5A7Q9GZV3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.45■□□□□ 0.86
SLC5A7Q9GZV3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC5A7Q9GZV3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SLC5A7Q9GZV3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SLC5A7Q9GZV3 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.44■□□□□ 0.86
SLC5A7Q9GZV3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SLC5A7Q9GZV3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
SLC5A7Q9GZV3 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC5A7Q9GZV3 AC110285.7-201ENST00000624417 1536 ntBASIC20.43■□□□□ 0.86
SLC5A7Q9GZV3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SLC5A7Q9GZV3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC5A7Q9GZV3 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SLC5A7Q9GZV3 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC5A7Q9GZV3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SLC5A7Q9GZV3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC5A7Q9GZV3 AC142472.1-201ENST00000612013 1741 ntBASIC20.42■□□□□ 0.86
SLC5A7Q9GZV3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.42■□□□□ 0.86
SLC5A7Q9GZV3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SLC5A7Q9GZV3 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC5A7Q9GZV3 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC5A7Q9GZV3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SLC5A7Q9GZV3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC5A7Q9GZV3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC5A7Q9GZV3 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
SLC5A7Q9GZV3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
SLC5A7Q9GZV3 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
SLC5A7Q9GZV3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.41■□□□□ 0.86
SLC5A7Q9GZV3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC5A7Q9GZV3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC5A7Q9GZV3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC5A7Q9GZV3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.4■□□□□ 0.86
SLC5A7Q9GZV3 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
SLC5A7Q9GZV3 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SLC5A7Q9GZV3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
SLC5A7Q9GZV3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
SLC5A7Q9GZV3 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SLC5A7Q9GZV3 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
SLC5A7Q9GZV3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
SLC5A7Q9GZV3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
SLC5A7Q9GZV3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.39■□□□□ 0.85
SLC5A7Q9GZV3 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.39■□□□□ 0.85
SLC5A7Q9GZV3 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC5A7Q9GZV3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SLC5A7Q9GZV3 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC5A7Q9GZV3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.39■□□□□ 0.85
SLC5A7Q9GZV3 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SLC5A7Q9GZV3 WHAMMP3-201ENST00000611636 1609 ntBASIC20.38■□□□□ 0.85
SLC5A7Q9GZV3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC5A7Q9GZV3 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC5A7Q9GZV3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC5A7Q9GZV3 AP006261.1-201ENST00000584783 668 ntBASIC20.38■□□□□ 0.85
SLC5A7Q9GZV3 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC5A7Q9GZV3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC5A7Q9GZV3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
SLC5A7Q9GZV3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC5A7Q9GZV3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC5A7Q9GZV3 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC5A7Q9GZV3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC5A7Q9GZV3 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC5A7Q9GZV3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC5A7Q9GZV3 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC5A7Q9GZV3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC5A7Q9GZV3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC5A7Q9GZV3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC5A7Q9GZV3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC5A7Q9GZV3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms