Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.99■■□□□ 1.11
COL12A1Q99715 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.99■■□□□ 1.11
COL12A1Q99715 UNC93B8-201ENST00000511903 705 ntBASIC21.98■■□□□ 1.11
COL12A1Q99715 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL12A1Q99715 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
COL12A1Q99715 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL12A1Q99715 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL12A1Q99715 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
COL12A1Q99715 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.98■■□□□ 1.11
COL12A1Q99715 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL12A1Q99715 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
COL12A1Q99715 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.97■■□□□ 1.11
COL12A1Q99715 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL12A1Q99715 AC133561.4-201ENST00000566112 224 ntBASIC21.96■■□□□ 1.11
COL12A1Q99715 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL12A1Q99715 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL12A1Q99715 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.96■■□□□ 1.11
COL12A1Q99715 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
COL12A1Q99715 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
COL12A1Q99715 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
COL12A1Q99715 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL12A1Q99715 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
COL12A1Q99715 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.95■■□□□ 1.1
COL12A1Q99715 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.95■■□□□ 1.1
COL12A1Q99715 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL12A1Q99715 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.95■■□□□ 1.1
COL12A1Q99715 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL12A1Q99715 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.94■■□□□ 1.1
COL12A1Q99715 MIR5787-201ENST00000611784 55 ntBASIC21.94■■□□□ 1.1
COL12A1Q99715 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
COL12A1Q99715 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.94■■□□□ 1.1
COL12A1Q99715 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL12A1Q99715 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.94■■□□□ 1.1
COL12A1Q99715 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
COL12A1Q99715 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
COL12A1Q99715 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL12A1Q99715 AC135279.3-201ENST00000610945 1311 ntBASIC21.93■■□□□ 1.1
COL12A1Q99715 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.93■■□□□ 1.1
COL12A1Q99715 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL12A1Q99715 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.93■■□□□ 1.1
COL12A1Q99715 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
COL12A1Q99715 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.93■■□□□ 1.1
COL12A1Q99715 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL12A1Q99715 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.93■■□□□ 1.1
COL12A1Q99715 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.93■■□□□ 1.1
COL12A1Q99715 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.93■■□□□ 1.1
COL12A1Q99715 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL12A1Q99715 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL12A1Q99715 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.92■■□□□ 1.1
COL12A1Q99715 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.92■■□□□ 1.1
COL12A1Q99715 AC019171.1-201ENST00000601251 1056 ntBASIC21.92■■□□□ 1.1
COL12A1Q99715 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
COL12A1Q99715 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL12A1Q99715 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL12A1Q99715 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL12A1Q99715 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.91■■□□□ 1.1
COL12A1Q99715 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.91■■□□□ 1.1
COL12A1Q99715 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL12A1Q99715 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL12A1Q99715 LONRF2P2-201ENST00000439212 571 ntBASIC21.91■■□□□ 1.1
COL12A1Q99715 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC21.91■■□□□ 1.1
COL12A1Q99715 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.91■■□□□ 1.1
COL12A1Q99715 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.9■■□□□ 1.1
COL12A1Q99715 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL12A1Q99715 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.9■■□□□ 1.1
COL12A1Q99715 MIR4466-201ENST00000606121 54 ntBASIC21.9■■□□□ 1.1
COL12A1Q99715 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.9■■□□□ 1.1
COL12A1Q99715 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
COL12A1Q99715 AL136116.3-201ENST00000402907 1138 ntBASIC21.89■■□□□ 1.1
COL12A1Q99715 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
COL12A1Q99715 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.89■■□□□ 1.09
COL12A1Q99715 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.88■■□□□ 1.09
COL12A1Q99715 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL12A1Q99715 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.88■■□□□ 1.09
COL12A1Q99715 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.88■■□□□ 1.09
COL12A1Q99715 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
COL12A1Q99715 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
COL12A1Q99715 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.87■■□□□ 1.09
COL12A1Q99715 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
COL12A1Q99715 AC096631.2-201ENST00000436136 790 ntBASIC21.87■■□□□ 1.09
COL12A1Q99715 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
COL12A1Q99715 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL12A1Q99715 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.86■■□□□ 1.09
COL12A1Q99715 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
COL12A1Q99715 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL12A1Q99715 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL12A1Q99715 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL12A1Q99715 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL12A1Q99715 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL12A1Q99715 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL12A1Q99715 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
COL12A1Q99715 KRT16P3-201ENST00000439127 1283 ntBASIC21.85■■□□□ 1.09
COL12A1Q99715 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.85■■□□□ 1.09
COL12A1Q99715 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
COL12A1Q99715 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.84■■□□□ 1.09
COL12A1Q99715 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.84■■□□□ 1.09
COL12A1Q99715 AC100797.4-201ENST00000631653 1827 ntBASIC21.84■■□□□ 1.09
COL12A1Q99715 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.83■■□□□ 1.09
COL12A1Q99715 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL12A1Q99715 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms