Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC133552.2-201ENST00000619106 1032 ntBASIC25.62■■□□□ 1.69
CDK5RAP1Q96SZ6 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CDK5RAP1Q96SZ6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDK5RAP1Q96SZ6 AC026202.3-201ENST00000600805 1127 ntBASIC25.61■■□□□ 1.69
CDK5RAP1Q96SZ6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
CDK5RAP1Q96SZ6 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDK5RAP1Q96SZ6 AC009831.1-201ENST00000580420 1582 ntBASIC25.61■■□□□ 1.69
CDK5RAP1Q96SZ6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDK5RAP1Q96SZ6 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CDK5RAP1Q96SZ6 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CDK5RAP1Q96SZ6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
CDK5RAP1Q96SZ6 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
CDK5RAP1Q96SZ6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CDK5RAP1Q96SZ6 AC012354.3-201ENST00000623734 483 ntBASIC25.59■■□□□ 1.69
CDK5RAP1Q96SZ6 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDK5RAP1Q96SZ6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.58■■□□□ 1.69
CDK5RAP1Q96SZ6 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
CDK5RAP1Q96SZ6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.58■■□□□ 1.69
CDK5RAP1Q96SZ6 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC25.58■■□□□ 1.69
CDK5RAP1Q96SZ6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDK5RAP1Q96SZ6 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CDK5RAP1Q96SZ6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.58■■□□□ 1.69
CDK5RAP1Q96SZ6 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDK5RAP1Q96SZ6 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDK5RAP1Q96SZ6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC25.57■■□□□ 1.68
CDK5RAP1Q96SZ6 RAP2CP1-202ENST00000605179 643 ntBASIC25.57■■□□□ 1.68
CDK5RAP1Q96SZ6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
CDK5RAP1Q96SZ6 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
CDK5RAP1Q96SZ6 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CDK5RAP1Q96SZ6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
CDK5RAP1Q96SZ6 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDK5RAP1Q96SZ6 KRT18P60-201ENST00000312876 1297 ntBASIC25.56■■□□□ 1.68
CDK5RAP1Q96SZ6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDK5RAP1Q96SZ6 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC25.56■■□□□ 1.68
CDK5RAP1Q96SZ6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CDK5RAP1Q96SZ6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CDK5RAP1Q96SZ6 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.55■■□□□ 1.68
CDK5RAP1Q96SZ6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CDK5RAP1Q96SZ6 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CDK5RAP1Q96SZ6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CDK5RAP1Q96SZ6 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.55■■□□□ 1.68
CDK5RAP1Q96SZ6 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.55■■□□□ 1.68
CDK5RAP1Q96SZ6 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.54■■□□□ 1.68
CDK5RAP1Q96SZ6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC25.54■■□□□ 1.68
CDK5RAP1Q96SZ6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDK5RAP1Q96SZ6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.54■■□□□ 1.68
CDK5RAP1Q96SZ6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CDK5RAP1Q96SZ6 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
CDK5RAP1Q96SZ6 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDK5RAP1Q96SZ6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC25.53■■□□□ 1.68
CDK5RAP1Q96SZ6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDK5RAP1Q96SZ6 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
CDK5RAP1Q96SZ6 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDK5RAP1Q96SZ6 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.53■■□□□ 1.68
CDK5RAP1Q96SZ6 AC142472.1-201ENST00000612013 1741 ntBASIC25.52■■□□□ 1.68
CDK5RAP1Q96SZ6 AL592293.1-201ENST00000502889 1188 ntBASIC25.52■■□□□ 1.68
CDK5RAP1Q96SZ6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.52■■□□□ 1.68
CDK5RAP1Q96SZ6 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC25.52■■□□□ 1.68
CDK5RAP1Q96SZ6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
CDK5RAP1Q96SZ6 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CDK5RAP1Q96SZ6 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
CDK5RAP1Q96SZ6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CDK5RAP1Q96SZ6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CDK5RAP1Q96SZ6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
CDK5RAP1Q96SZ6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CDK5RAP1Q96SZ6 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
CDK5RAP1Q96SZ6 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC25.49■■□□□ 1.67
CDK5RAP1Q96SZ6 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.48■■□□□ 1.67
CDK5RAP1Q96SZ6 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.48■■□□□ 1.67
CDK5RAP1Q96SZ6 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDK5RAP1Q96SZ6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
CDK5RAP1Q96SZ6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDK5RAP1Q96SZ6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDK5RAP1Q96SZ6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.47■■□□□ 1.67
CDK5RAP1Q96SZ6 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CDK5RAP1Q96SZ6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
CDK5RAP1Q96SZ6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
CDK5RAP1Q96SZ6 AC129492.7-201ENST00000622992 756 ntBASIC25.47■■□□□ 1.67
CDK5RAP1Q96SZ6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDK5RAP1Q96SZ6 TSPY13P-201ENST00000338964 914 ntBASIC25.46■■□□□ 1.67
CDK5RAP1Q96SZ6 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDK5RAP1Q96SZ6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
CDK5RAP1Q96SZ6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDK5RAP1Q96SZ6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
CDK5RAP1Q96SZ6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC25.45■■□□□ 1.66
CDK5RAP1Q96SZ6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
CDK5RAP1Q96SZ6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
CDK5RAP1Q96SZ6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
CDK5RAP1Q96SZ6 AP004609.3-201ENST00000610705 1884 ntBASIC25.45■■□□□ 1.66
CDK5RAP1Q96SZ6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.44■■□□□ 1.66
CDK5RAP1Q96SZ6 ATP5G2P3-201ENST00000429083 425 ntBASIC25.44■■□□□ 1.66
CDK5RAP1Q96SZ6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
CDK5RAP1Q96SZ6 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.44■■□□□ 1.66
CDK5RAP1Q96SZ6 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CDK5RAP1Q96SZ6 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CDK5RAP1Q96SZ6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
CDK5RAP1Q96SZ6 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
CDK5RAP1Q96SZ6 AC004987.1-201ENST00000428627 508 ntBASIC25.43■■□□□ 1.66
CDK5RAP1Q96SZ6 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC25.42■■□□□ 1.66
CDK5RAP1Q96SZ6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms