Protein–RNA interactions for Protein: Q8TB73

NDNF, Protein NDNF, humanhuman

Predictions only

Length 568 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNFQ8TB73 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NDNFQ8TB73 AL391121.1-201ENST00000607967 1349 ntBASIC22.02■■□□□ 1.12
NDNFQ8TB73 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.11
NDNFQ8TB73 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
NDNFQ8TB73 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
NDNFQ8TB73 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.01■■□□□ 1.11
NDNFQ8TB73 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NDNFQ8TB73 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NDNFQ8TB73 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22■■□□□ 1.11
NDNFQ8TB73 CAHM-201ENST00000604200 896 ntBASIC22■■□□□ 1.11
NDNFQ8TB73 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
NDNFQ8TB73 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NDNFQ8TB73 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
NDNFQ8TB73 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22■■□□□ 1.11
NDNFQ8TB73 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NDNFQ8TB73 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NDNFQ8TB73 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NDNFQ8TB73 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC21.99■■□□□ 1.11
NDNFQ8TB73 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
NDNFQ8TB73 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NDNFQ8TB73 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
NDNFQ8TB73 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NDNFQ8TB73 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NDNFQ8TB73 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.97■■□□□ 1.11
NDNFQ8TB73 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.97■■□□□ 1.11
NDNFQ8TB73 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NDNFQ8TB73 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NDNFQ8TB73 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
NDNFQ8TB73 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NDNFQ8TB73 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.97■■□□□ 1.11
NDNFQ8TB73 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.97■■□□□ 1.11
NDNFQ8TB73 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NDNFQ8TB73 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NDNFQ8TB73 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
NDNFQ8TB73 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.96■■□□□ 1.11
NDNFQ8TB73 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.96■■□□□ 1.11
NDNFQ8TB73 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NDNFQ8TB73 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NDNFQ8TB73 AC138932.3-201ENST00000567634 1902 ntBASIC21.96■■□□□ 1.11
NDNFQ8TB73 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NDNFQ8TB73 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.96■■□□□ 1.11
NDNFQ8TB73 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NDNFQ8TB73 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NDNFQ8TB73 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.95■■□□□ 1.1
NDNFQ8TB73 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NDNFQ8TB73 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NDNFQ8TB73 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NDNFQ8TB73 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.94■■□□□ 1.1
NDNFQ8TB73 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.94■■□□□ 1.1
NDNFQ8TB73 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NDNFQ8TB73 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
NDNFQ8TB73 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NDNFQ8TB73 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NDNFQ8TB73 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NDNFQ8TB73 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.93■■□□□ 1.1
NDNFQ8TB73 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.93■■□□□ 1.1
NDNFQ8TB73 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NDNFQ8TB73 AC068473.5-201ENST00000616428 2072 ntBASIC21.92■■□□□ 1.1
NDNFQ8TB73 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NDNFQ8TB73 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NDNFQ8TB73 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NDNFQ8TB73 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
NDNFQ8TB73 SUZ12P1-203ENST00000578195 985 ntBASIC21.92■■□□□ 1.1
NDNFQ8TB73 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDNFQ8TB73 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NDNFQ8TB73 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NDNFQ8TB73 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
NDNFQ8TB73 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NDNFQ8TB73 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDNFQ8TB73 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDNFQ8TB73 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDNFQ8TB73 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NDNFQ8TB73 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.9■■□□□ 1.1
NDNFQ8TB73 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDNFQ8TB73 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDNFQ8TB73 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDNFQ8TB73 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NDNFQ8TB73 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
NDNFQ8TB73 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
NDNFQ8TB73 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC21.89■■□□□ 1.09
NDNFQ8TB73 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NDNFQ8TB73 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.09
NDNFQ8TB73 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.89■■□□□ 1.09
NDNFQ8TB73 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.88■■□□□ 1.09
NDNFQ8TB73 AC022211.4-201ENST00000625094 2161 ntBASIC21.88■■□□□ 1.09
NDNFQ8TB73 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
NDNFQ8TB73 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.88■■□□□ 1.09
NDNFQ8TB73 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.88■■□□□ 1.09
NDNFQ8TB73 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.87■■□□□ 1.09
NDNFQ8TB73 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
NDNFQ8TB73 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NDNFQ8TB73 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.87■■□□□ 1.09
NDNFQ8TB73 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NDNFQ8TB73 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NDNFQ8TB73 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NDNFQ8TB73 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.86■■□□□ 1.09
NDNFQ8TB73 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
NDNFQ8TB73 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NDNFQ8TB73 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NDNFQ8TB73 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms