Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
RTL9Q8NET4 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
RTL9Q8NET4 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC30.6■■■□□ 2.49
RTL9Q8NET4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
RTL9Q8NET4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
RTL9Q8NET4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RTL9Q8NET4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
RTL9Q8NET4 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC30.6■■■□□ 2.49
RTL9Q8NET4 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
RTL9Q8NET4 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
RTL9Q8NET4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.59■■■□□ 2.49
RTL9Q8NET4 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
RTL9Q8NET4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
RTL9Q8NET4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.48
RTL9Q8NET4 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
RTL9Q8NET4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC30.57■■■□□ 2.48
RTL9Q8NET4 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC30.57■■■□□ 2.48
RTL9Q8NET4 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
RTL9Q8NET4 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
RTL9Q8NET4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
RTL9Q8NET4 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
RTL9Q8NET4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
RTL9Q8NET4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.56■■■□□ 2.48
RTL9Q8NET4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
RTL9Q8NET4 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC30.54■■■□□ 2.48
RTL9Q8NET4 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
RTL9Q8NET4 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
RTL9Q8NET4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC30.54■■■□□ 2.48
RTL9Q8NET4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC30.54■■■□□ 2.48
RTL9Q8NET4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
RTL9Q8NET4 AL451085.2-201ENST00000605085 799 ntBASIC30.54■■■□□ 2.48
RTL9Q8NET4 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC30.53■■■□□ 2.48
RTL9Q8NET4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
RTL9Q8NET4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC30.53■■■□□ 2.48
RTL9Q8NET4 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC30.53■■■□□ 2.48
RTL9Q8NET4 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RTL9Q8NET4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RTL9Q8NET4 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC30.52■■■□□ 2.48
RTL9Q8NET4 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC30.52■■■□□ 2.48
RTL9Q8NET4 MIR6765-201ENST00000614092 87 ntBASIC30.52■■■□□ 2.48
RTL9Q8NET4 AL035685.1-201ENST00000636663 812 ntBASIC30.52■■■□□ 2.48
RTL9Q8NET4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC30.51■■■□□ 2.47
RTL9Q8NET4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC30.51■■■□□ 2.47
RTL9Q8NET4 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC30.51■■■□□ 2.47
RTL9Q8NET4 LINC01003-201ENST00000564834 1764 ntBASIC30.5■■■□□ 2.47
RTL9Q8NET4 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
RTL9Q8NET4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC30.49■■■□□ 2.47
RTL9Q8NET4 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC30.48■■■□□ 2.47
RTL9Q8NET4 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC30.48■■■□□ 2.47
RTL9Q8NET4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
RTL9Q8NET4 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RTL9Q8NET4 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
RTL9Q8NET4 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RTL9Q8NET4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.47■■■□□ 2.47
RTL9Q8NET4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC30.47■■■□□ 2.47
RTL9Q8NET4 AC139426.1-201ENST00000568218 2529 ntBASIC30.47■■■□□ 2.47
RTL9Q8NET4 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
RTL9Q8NET4 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
RTL9Q8NET4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
RTL9Q8NET4 AL449106.1-201ENST00000608517 1980 ntBASIC30.45■■■□□ 2.47
RTL9Q8NET4 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
RTL9Q8NET4 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
RTL9Q8NET4 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RTL9Q8NET4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC30.44■■■□□ 2.46
RTL9Q8NET4 IDNK-203ENST00000405990 629 ntTSL 2 BASIC30.44■■■□□ 2.46
RTL9Q8NET4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
RTL9Q8NET4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RTL9Q8NET4 AC074183.2-201ENST00000623112 922 ntBASIC30.44■■■□□ 2.46
RTL9Q8NET4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC30.44■■■□□ 2.46
RTL9Q8NET4 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
RTL9Q8NET4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
RTL9Q8NET4 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC30.43■■■□□ 2.46
RTL9Q8NET4 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC30.42■■■□□ 2.46
RTL9Q8NET4 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RTL9Q8NET4 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
RTL9Q8NET4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC30.41■■■□□ 2.46
RTL9Q8NET4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC30.41■■■□□ 2.46
RTL9Q8NET4 AC018755.3-202ENST00000596210 929 ntBASIC30.41■■■□□ 2.46
RTL9Q8NET4 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC30.41■■■□□ 2.46
RTL9Q8NET4 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RTL9Q8NET4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RTL9Q8NET4 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RTL9Q8NET4 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC30.41■■■□□ 2.46
RTL9Q8NET4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.4■■■□□ 2.46
RTL9Q8NET4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
RTL9Q8NET4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.4■■■□□ 2.46
RTL9Q8NET4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
RTL9Q8NET4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC30.39■■■□□ 2.46
RTL9Q8NET4 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC30.39■■■□□ 2.45
RTL9Q8NET4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC30.39■■■□□ 2.45
RTL9Q8NET4 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.45
RTL9Q8NET4 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
RTL9Q8NET4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC30.38■■■□□ 2.45
RTL9Q8NET4 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RTL9Q8NET4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC30.38■■■□□ 2.45
RTL9Q8NET4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
RTL9Q8NET4 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
RTL9Q8NET4 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
RTL9Q8NET4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
RTL9Q8NET4 AC010980.1-201ENST00000587192 1142 ntBASIC30.37■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms