Protein–RNA interactions for Protein: Q8IWL2

SFTPA1, Pulmonary surfactant-associated protein A1, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPA1Q8IWL2 DRD5P2-201ENST00000421395 2012 ntBASIC25.14■■□□□ 1.62
SFTPA1Q8IWL2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.14■■□□□ 1.62
SFTPA1Q8IWL2 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.14■■□□□ 1.62
SFTPA1Q8IWL2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SFTPA1Q8IWL2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SFTPA1Q8IWL2 KRT8P33-201ENST00000508125 1423 ntBASIC25.13■■□□□ 1.61
SFTPA1Q8IWL2 AL451085.2-201ENST00000605085 799 ntBASIC25.13■■□□□ 1.61
SFTPA1Q8IWL2 BHLHE23-202ENST00000612929 1109 ntBASIC25.13■■□□□ 1.61
SFTPA1Q8IWL2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
SFTPA1Q8IWL2 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.13■■□□□ 1.61
SFTPA1Q8IWL2 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
SFTPA1Q8IWL2 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC25.12■■□□□ 1.61
SFTPA1Q8IWL2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC25.12■■□□□ 1.61
SFTPA1Q8IWL2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
SFTPA1Q8IWL2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SFTPA1Q8IWL2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SFTPA1Q8IWL2 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
SFTPA1Q8IWL2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.11■■□□□ 1.61
SFTPA1Q8IWL2 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
SFTPA1Q8IWL2 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
SFTPA1Q8IWL2 PVT1_1.1-201ENST00000615125 194 ntBASIC25.11■■□□□ 1.61
SFTPA1Q8IWL2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC25.11■■□□□ 1.61
SFTPA1Q8IWL2 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
SFTPA1Q8IWL2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SFTPA1Q8IWL2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SFTPA1Q8IWL2 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
SFTPA1Q8IWL2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC25.1■■□□□ 1.61
SFTPA1Q8IWL2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
SFTPA1Q8IWL2 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC25.1■■□□□ 1.61
SFTPA1Q8IWL2 MIR6765-201ENST00000614092 87 ntBASIC25.1■■□□□ 1.61
SFTPA1Q8IWL2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
SFTPA1Q8IWL2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
SFTPA1Q8IWL2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.1■■□□□ 1.61
SFTPA1Q8IWL2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
SFTPA1Q8IWL2 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SFTPA1Q8IWL2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC25.09■■□□□ 1.61
SFTPA1Q8IWL2 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.09■■□□□ 1.61
SFTPA1Q8IWL2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SFTPA1Q8IWL2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
SFTPA1Q8IWL2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SFTPA1Q8IWL2 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SFTPA1Q8IWL2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
SFTPA1Q8IWL2 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.08■■□□□ 1.61
SFTPA1Q8IWL2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
SFTPA1Q8IWL2 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
SFTPA1Q8IWL2 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SFTPA1Q8IWL2 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC25.07■■□□□ 1.6
SFTPA1Q8IWL2 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC25.07■■□□□ 1.6
SFTPA1Q8IWL2 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SFTPA1Q8IWL2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC25.06■■□□□ 1.6
SFTPA1Q8IWL2 AL035685.1-201ENST00000636663 812 ntBASIC25.06■■□□□ 1.6
SFTPA1Q8IWL2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
SFTPA1Q8IWL2 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC25.06■■□□□ 1.6
SFTPA1Q8IWL2 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.06■■□□□ 1.6
SFTPA1Q8IWL2 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SFTPA1Q8IWL2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SFTPA1Q8IWL2 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC25.05■■□□□ 1.6
SFTPA1Q8IWL2 AC103834.1-201ENST00000520383 144 ntBASIC25.05■■□□□ 1.6
SFTPA1Q8IWL2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
SFTPA1Q8IWL2 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC25.05■■□□□ 1.6
SFTPA1Q8IWL2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SFTPA1Q8IWL2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC25.04■■□□□ 1.6
SFTPA1Q8IWL2 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
SFTPA1Q8IWL2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SFTPA1Q8IWL2 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SFTPA1Q8IWL2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.03■■□□□ 1.6
SFTPA1Q8IWL2 AC139795.1-202ENST00000500444 432 ntBASIC25.03■■□□□ 1.6
SFTPA1Q8IWL2 AC018755.3-202ENST00000596210 929 ntBASIC25.03■■□□□ 1.6
SFTPA1Q8IWL2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC25.03■■□□□ 1.6
SFTPA1Q8IWL2 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
SFTPA1Q8IWL2 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC25.02■■□□□ 1.6
SFTPA1Q8IWL2 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC25.01■■□□□ 1.59
SFTPA1Q8IWL2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SFTPA1Q8IWL2 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.01■■□□□ 1.59
SFTPA1Q8IWL2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SFTPA1Q8IWL2 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SFTPA1Q8IWL2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SFTPA1Q8IWL2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
SFTPA1Q8IWL2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
SFTPA1Q8IWL2 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
SFTPA1Q8IWL2 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25■■□□□ 1.59
SFTPA1Q8IWL2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SFTPA1Q8IWL2 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
SFTPA1Q8IWL2 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC25■■□□□ 1.59
SFTPA1Q8IWL2 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25■■□□□ 1.59
SFTPA1Q8IWL2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25■■□□□ 1.59
SFTPA1Q8IWL2 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SFTPA1Q8IWL2 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
SFTPA1Q8IWL2 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SFTPA1Q8IWL2 AL449106.1-201ENST00000608517 1980 ntBASIC24.98■■□□□ 1.59
SFTPA1Q8IWL2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SFTPA1Q8IWL2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SFTPA1Q8IWL2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
SFTPA1Q8IWL2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
SFTPA1Q8IWL2 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SFTPA1Q8IWL2 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SFTPA1Q8IWL2 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.97■■□□□ 1.59
SFTPA1Q8IWL2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SFTPA1Q8IWL2 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SFTPA1Q8IWL2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms