Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC31.38■■■□□ 2.61
COPS6Q7L5N1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
COPS6Q7L5N1 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
COPS6Q7L5N1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
COPS6Q7L5N1 DUX4L9-201ENST00000449051 1259 ntBASIC31.37■■■□□ 2.61
COPS6Q7L5N1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
COPS6Q7L5N1 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
COPS6Q7L5N1 LINC01003-201ENST00000564834 1764 ntBASIC31.37■■■□□ 2.61
COPS6Q7L5N1 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
COPS6Q7L5N1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
COPS6Q7L5N1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC31.36■■■□□ 2.61
COPS6Q7L5N1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
COPS6Q7L5N1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
COPS6Q7L5N1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
COPS6Q7L5N1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
COPS6Q7L5N1 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
COPS6Q7L5N1 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
COPS6Q7L5N1 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
COPS6Q7L5N1 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC31.34■■■□□ 2.61
COPS6Q7L5N1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.33■■■□□ 2.61
COPS6Q7L5N1 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
COPS6Q7L5N1 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
COPS6Q7L5N1 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC31.33■■■□□ 2.61
COPS6Q7L5N1 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
COPS6Q7L5N1 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31.33■■■□□ 2.61
COPS6Q7L5N1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC31.33■■■□□ 2.61
COPS6Q7L5N1 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
COPS6Q7L5N1 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC31.32■■■□□ 2.6
COPS6Q7L5N1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
COPS6Q7L5N1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC31.31■■■□□ 2.6
COPS6Q7L5N1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
COPS6Q7L5N1 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC31.31■■■□□ 2.6
COPS6Q7L5N1 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC31.31■■■□□ 2.6
COPS6Q7L5N1 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.31■■■□□ 2.6
COPS6Q7L5N1 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
COPS6Q7L5N1 AL449106.1-201ENST00000608517 1980 ntBASIC31.3■■■□□ 2.6
COPS6Q7L5N1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
COPS6Q7L5N1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC31.3■■■□□ 2.6
COPS6Q7L5N1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
COPS6Q7L5N1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC31.3■■■□□ 2.6
COPS6Q7L5N1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
COPS6Q7L5N1 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
COPS6Q7L5N1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC31.3■■■□□ 2.6
COPS6Q7L5N1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC31.3■■■□□ 2.6
COPS6Q7L5N1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
COPS6Q7L5N1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.3■■■□□ 2.6
COPS6Q7L5N1 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC31.29■■■□□ 2.6
COPS6Q7L5N1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
COPS6Q7L5N1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
COPS6Q7L5N1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
COPS6Q7L5N1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
COPS6Q7L5N1 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
COPS6Q7L5N1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
COPS6Q7L5N1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
COPS6Q7L5N1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
COPS6Q7L5N1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC31.26■■■□□ 2.59
COPS6Q7L5N1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
COPS6Q7L5N1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.26■■■□□ 2.59
COPS6Q7L5N1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.26■■■□□ 2.59
COPS6Q7L5N1 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
COPS6Q7L5N1 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
COPS6Q7L5N1 RARRES2P1-201ENST00000474487 481 ntBASIC31.25■■■□□ 2.59
COPS6Q7L5N1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC31.25■■■□□ 2.59
COPS6Q7L5N1 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.25■■■□□ 2.59
COPS6Q7L5N1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC31.24■■■□□ 2.59
COPS6Q7L5N1 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
COPS6Q7L5N1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
COPS6Q7L5N1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC31.23■■■□□ 2.59
COPS6Q7L5N1 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC31.23■■■□□ 2.59
COPS6Q7L5N1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
COPS6Q7L5N1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
COPS6Q7L5N1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
COPS6Q7L5N1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
COPS6Q7L5N1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
COPS6Q7L5N1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.2■■■□□ 2.59
COPS6Q7L5N1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC31.2■■■□□ 2.59
COPS6Q7L5N1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
COPS6Q7L5N1 MIR6765-201ENST00000614092 87 ntBASIC31.19■■■□□ 2.58
COPS6Q7L5N1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
COPS6Q7L5N1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
COPS6Q7L5N1 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC31.18■■■□□ 2.58
COPS6Q7L5N1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC31.18■■■□□ 2.58
COPS6Q7L5N1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
COPS6Q7L5N1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
COPS6Q7L5N1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
COPS6Q7L5N1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC31.17■■■□□ 2.58
COPS6Q7L5N1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC31.17■■■□□ 2.58
COPS6Q7L5N1 BX255925.1-201ENST00000566954 1854 ntBASIC31.16■■■□□ 2.58
COPS6Q7L5N1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
COPS6Q7L5N1 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
COPS6Q7L5N1 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
COPS6Q7L5N1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
COPS6Q7L5N1 AC018755.3-202ENST00000596210 929 ntBASIC31.16■■■□□ 2.58
COPS6Q7L5N1 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
COPS6Q7L5N1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.15■■■□□ 2.58
COPS6Q7L5N1 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
COPS6Q7L5N1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
COPS6Q7L5N1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC31.14■■■□□ 2.58
COPS6Q7L5N1 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
COPS6Q7L5N1 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms