Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
C9orf139Q6ZV77 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf139Q6ZV77 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf139Q6ZV77 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf139Q6ZV77 AL359504.2-201ENST00000605506 1601 ntBASIC19.92■□□□□ 0.78
C9orf139Q6ZV77 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.92■□□□□ 0.78
C9orf139Q6ZV77 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.92■□□□□ 0.78
C9orf139Q6ZV77 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
C9orf139Q6ZV77 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
C9orf139Q6ZV77 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC19.91■□□□□ 0.78
C9orf139Q6ZV77 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf139Q6ZV77 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf139Q6ZV77 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
C9orf139Q6ZV77 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC19.9■□□□□ 0.78
C9orf139Q6ZV77 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf139Q6ZV77 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
C9orf139Q6ZV77 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
C9orf139Q6ZV77 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC19.9■□□□□ 0.78
C9orf139Q6ZV77 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.9■□□□□ 0.78
C9orf139Q6ZV77 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.9■□□□□ 0.78
C9orf139Q6ZV77 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
C9orf139Q6ZV77 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.9■□□□□ 0.78
C9orf139Q6ZV77 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
C9orf139Q6ZV77 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf139Q6ZV77 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
C9orf139Q6ZV77 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
C9orf139Q6ZV77 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.89■□□□□ 0.77
C9orf139Q6ZV77 SPCS2P3-201ENST00000500401 656 ntBASIC19.89■□□□□ 0.77
C9orf139Q6ZV77 MIR6765-201ENST00000614092 87 ntBASIC19.89■□□□□ 0.77
C9orf139Q6ZV77 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C9orf139Q6ZV77 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
C9orf139Q6ZV77 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
C9orf139Q6ZV77 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
C9orf139Q6ZV77 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.88■□□□□ 0.77
C9orf139Q6ZV77 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.88■□□□□ 0.77
C9orf139Q6ZV77 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.88■□□□□ 0.77
C9orf139Q6ZV77 AC139426.1-201ENST00000568218 2529 ntBASIC19.88■□□□□ 0.77
C9orf139Q6ZV77 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.88■□□□□ 0.77
C9orf139Q6ZV77 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
C9orf139Q6ZV77 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
C9orf139Q6ZV77 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
C9orf139Q6ZV77 AC018755.3-202ENST00000596210 929 ntBASIC19.87■□□□□ 0.77
C9orf139Q6ZV77 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.87■□□□□ 0.77
C9orf139Q6ZV77 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf139Q6ZV77 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf139Q6ZV77 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
C9orf139Q6ZV77 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
C9orf139Q6ZV77 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
C9orf139Q6ZV77 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.85■□□□□ 0.77
C9orf139Q6ZV77 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.85■□□□□ 0.77
C9orf139Q6ZV77 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
C9orf139Q6ZV77 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf139Q6ZV77 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
C9orf139Q6ZV77 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf139Q6ZV77 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
C9orf139Q6ZV77 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
C9orf139Q6ZV77 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
C9orf139Q6ZV77 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.83■□□□□ 0.77
C9orf139Q6ZV77 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.83■□□□□ 0.77
C9orf139Q6ZV77 BHLHE23-202ENST00000612929 1109 ntBASIC19.83■□□□□ 0.77
C9orf139Q6ZV77 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
C9orf139Q6ZV77 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.82■□□□□ 0.76
C9orf139Q6ZV77 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.82■□□□□ 0.76
C9orf139Q6ZV77 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C9orf139Q6ZV77 AC139795.1-202ENST00000500444 432 ntBASIC19.82■□□□□ 0.76
C9orf139Q6ZV77 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.82■□□□□ 0.76
C9orf139Q6ZV77 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
C9orf139Q6ZV77 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
C9orf139Q6ZV77 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.81■□□□□ 0.76
C9orf139Q6ZV77 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.81■□□□□ 0.76
C9orf139Q6ZV77 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.81■□□□□ 0.76
C9orf139Q6ZV77 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf139Q6ZV77 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
C9orf139Q6ZV77 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf139Q6ZV77 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
C9orf139Q6ZV77 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.8■□□□□ 0.76
C9orf139Q6ZV77 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.8■□□□□ 0.76
C9orf139Q6ZV77 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.8■□□□□ 0.76
C9orf139Q6ZV77 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
C9orf139Q6ZV77 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf139Q6ZV77 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.79■□□□□ 0.76
C9orf139Q6ZV77 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
C9orf139Q6ZV77 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf139Q6ZV77 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
C9orf139Q6ZV77 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
C9orf139Q6ZV77 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.78■□□□□ 0.76
C9orf139Q6ZV77 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C9orf139Q6ZV77 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
C9orf139Q6ZV77 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.78■□□□□ 0.76
C9orf139Q6ZV77 AC010980.1-201ENST00000587192 1142 ntBASIC19.78■□□□□ 0.76
C9orf139Q6ZV77 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
C9orf139Q6ZV77 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
C9orf139Q6ZV77 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.77■□□□□ 0.76
C9orf139Q6ZV77 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
C9orf139Q6ZV77 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
C9orf139Q6ZV77 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
C9orf139Q6ZV77 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
C9orf139Q6ZV77 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
C9orf139Q6ZV77 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.76■□□□□ 0.75
C9orf139Q6ZV77 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms