Protein–RNA interactions for Protein: Q6IEG0

SNRNP48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, humanhuman

Known RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48Q6IEG0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.34■■■□□ 2.13
SNRNP48Q6IEG0 MIR6765-201ENST00000614092 87 ntBASIC28.34■■■□□ 2.13
SNRNP48Q6IEG0 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SNRNP48Q6IEG0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC28.34■■■□□ 2.13
SNRNP48Q6IEG0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 DRD5P2-201ENST00000421395 2012 ntBASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.33■■■□□ 2.13
SNRNP48Q6IEG0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.32■■■□□ 2.12
SNRNP48Q6IEG0 AC010980.1-201ENST00000587192 1142 ntBASIC28.31■■■□□ 2.12
SNRNP48Q6IEG0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SNRNP48Q6IEG0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SNRNP48Q6IEG0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
SNRNP48Q6IEG0 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SNRNP48Q6IEG0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
SNRNP48Q6IEG0 AC018755.3-202ENST00000596210 929 ntBASIC28.29■■■□□ 2.12
SNRNP48Q6IEG0 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SNRNP48Q6IEG0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC28.27■■■□□ 2.12
SNRNP48Q6IEG0 AC139795.1-202ENST00000500444 432 ntBASIC28.27■■■□□ 2.12
SNRNP48Q6IEG0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC28.27■■■□□ 2.12
SNRNP48Q6IEG0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNRNP48Q6IEG0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNRNP48Q6IEG0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNRNP48Q6IEG0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC28.26■■■□□ 2.11
SNRNP48Q6IEG0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SNRNP48Q6IEG0 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SNRNP48Q6IEG0 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNRNP48Q6IEG0 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.25■■■□□ 2.11
SNRNP48Q6IEG0 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SNRNP48Q6IEG0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC28.25■■■□□ 2.11
SNRNP48Q6IEG0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNRNP48Q6IEG0 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SNRNP48Q6IEG0 AC074183.2-201ENST00000623112 922 ntBASIC28.24■■■□□ 2.11
SNRNP48Q6IEG0 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SNRNP48Q6IEG0 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SNRNP48Q6IEG0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNRNP48Q6IEG0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.23■■■□□ 2.11
SNRNP48Q6IEG0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SNRNP48Q6IEG0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.23■■■□□ 2.11
SNRNP48Q6IEG0 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC28.23■■■□□ 2.11
SNRNP48Q6IEG0 KRT8P33-201ENST00000508125 1423 ntBASIC28.23■■■□□ 2.11
SNRNP48Q6IEG0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC28.22■■■□□ 2.11
SNRNP48Q6IEG0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SNRNP48Q6IEG0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.22■■■□□ 2.11
SNRNP48Q6IEG0 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC28.22■■■□□ 2.11
SNRNP48Q6IEG0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
SNRNP48Q6IEG0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC28.22■■■□□ 2.11
SNRNP48Q6IEG0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.22■■■□□ 2.11
SNRNP48Q6IEG0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SNRNP48Q6IEG0 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SNRNP48Q6IEG0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
SNRNP48Q6IEG0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.21■■■□□ 2.11
SNRNP48Q6IEG0 HYI-210ENST00000486909 905 ntTSL 5 BASIC28.21■■■□□ 2.11
SNRNP48Q6IEG0 AL451085.2-201ENST00000605085 799 ntBASIC28.21■■■□□ 2.11
SNRNP48Q6IEG0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SNRNP48Q6IEG0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
SNRNP48Q6IEG0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC28.2■■■□□ 2.1
SNRNP48Q6IEG0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
SNRNP48Q6IEG0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC28.2■■■□□ 2.1
SNRNP48Q6IEG0 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.2■■■□□ 2.1
SNRNP48Q6IEG0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC28.19■■■□□ 2.1
SNRNP48Q6IEG0 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SNRNP48Q6IEG0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SNRNP48Q6IEG0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SNRNP48Q6IEG0 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.18■■■□□ 2.1
SNRNP48Q6IEG0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SNRNP48Q6IEG0 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 PVT1_1.1-201ENST00000615125 194 ntBASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 AL035685.1-201ENST00000636663 812 ntBASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 AL449106.1-201ENST00000608517 1980 ntBASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SNRNP48Q6IEG0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNRNP48Q6IEG0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.16■■■□□ 2.1
SNRNP48Q6IEG0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
SNRNP48Q6IEG0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
SNRNP48Q6IEG0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.16■■■□□ 2.1
SNRNP48Q6IEG0 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SNRNP48Q6IEG0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SNRNP48Q6IEG0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
SNRNP48Q6IEG0 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
SNRNP48Q6IEG0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
SNRNP48Q6IEG0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms