Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RNF43Q68DV7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.66■■□□□ 1.7
RNF43Q68DV7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.65■■□□□ 1.7
RNF43Q68DV7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF43Q68DV7 ECEL1P2-201ENST00000461596 1295 ntBASIC25.65■■□□□ 1.7
RNF43Q68DV7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
RNF43Q68DV7 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
RNF43Q68DV7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
RNF43Q68DV7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
RNF43Q68DV7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.69
RNF43Q68DV7 BX255925.1-201ENST00000566954 1854 ntBASIC25.64■■□□□ 1.69
RNF43Q68DV7 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.63■■□□□ 1.69
RNF43Q68DV7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
RNF43Q68DV7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.63■■□□□ 1.69
RNF43Q68DV7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.62■■□□□ 1.69
RNF43Q68DV7 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
RNF43Q68DV7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.62■■□□□ 1.69
RNF43Q68DV7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF43Q68DV7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.62■■□□□ 1.69
RNF43Q68DV7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF43Q68DV7 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
RNF43Q68DV7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
RNF43Q68DV7 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.61■■□□□ 1.69
RNF43Q68DV7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC25.61■■□□□ 1.69
RNF43Q68DV7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.61■■□□□ 1.69
RNF43Q68DV7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.61■■□□□ 1.69
RNF43Q68DV7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.61■■□□□ 1.69
RNF43Q68DV7 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF43Q68DV7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RNF43Q68DV7 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
RNF43Q68DV7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
RNF43Q68DV7 AL359258.2-201ENST00000564063 1566 ntBASIC25.6■■□□□ 1.69
RNF43Q68DV7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
RNF43Q68DV7 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF43Q68DV7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
RNF43Q68DV7 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
RNF43Q68DV7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
RNF43Q68DV7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC25.58■■□□□ 1.69
RNF43Q68DV7 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
RNF43Q68DV7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RNF43Q68DV7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
RNF43Q68DV7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RNF43Q68DV7 U85056.1-201ENST00000616429 682 ntBASIC25.57■■□□□ 1.68
RNF43Q68DV7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
RNF43Q68DV7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.57■■□□□ 1.68
RNF43Q68DV7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.57■■□□□ 1.68
RNF43Q68DV7 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF43Q68DV7 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC25.56■■□□□ 1.68
RNF43Q68DV7 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC25.56■■□□□ 1.68
RNF43Q68DV7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.56■■□□□ 1.68
RNF43Q68DV7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF43Q68DV7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF43Q68DV7 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF43Q68DV7 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RNF43Q68DV7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC25.55■■□□□ 1.68
RNF43Q68DV7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
RNF43Q68DV7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
RNF43Q68DV7 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF43Q68DV7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
RNF43Q68DV7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RNF43Q68DV7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.54■■□□□ 1.68
RNF43Q68DV7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
RNF43Q68DV7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.54■■□□□ 1.68
RNF43Q68DV7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC25.54■■□□□ 1.68
RNF43Q68DV7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
RNF43Q68DV7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC25.53■■□□□ 1.68
RNF43Q68DV7 AL449106.1-201ENST00000608517 1980 ntBASIC25.52■■□□□ 1.68
RNF43Q68DV7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
RNF43Q68DV7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF43Q68DV7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF43Q68DV7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC25.51■■□□□ 1.67
RNF43Q68DV7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF43Q68DV7 AC025884.2-201ENST00000553429 711 ntBASIC25.51■■□□□ 1.67
RNF43Q68DV7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.51■■□□□ 1.67
RNF43Q68DV7 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.51■■□□□ 1.67
RNF43Q68DV7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
RNF43Q68DV7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.51■■□□□ 1.67
RNF43Q68DV7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
RNF43Q68DV7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF43Q68DV7 TSPY13P-201ENST00000338964 914 ntBASIC25.5■■□□□ 1.67
RNF43Q68DV7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF43Q68DV7 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
RNF43Q68DV7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
RNF43Q68DV7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC25.5■■□□□ 1.67
RNF43Q68DV7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF43Q68DV7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF43Q68DV7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF43Q68DV7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
RNF43Q68DV7 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
RNF43Q68DV7 GFER-205ENST00000569451 517 ntTSL 5 BASIC25.49■■□□□ 1.67
RNF43Q68DV7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
RNF43Q68DV7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
RNF43Q68DV7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
RNF43Q68DV7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.48■■□□□ 1.67
RNF43Q68DV7 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.48■■□□□ 1.67
RNF43Q68DV7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.47■■□□□ 1.67
RNF43Q68DV7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
RNF43Q68DV7 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
RNF43Q68DV7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
RNF43Q68DV7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms