Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
FREM1Q5H8C1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.76■■□□□ 1.07
FREM1Q5H8C1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.76■■□□□ 1.07
FREM1Q5H8C1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FREM1Q5H8C1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FREM1Q5H8C1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
FREM1Q5H8C1 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FREM1Q5H8C1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
FREM1Q5H8C1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
FREM1Q5H8C1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.75■■□□□ 1.07
FREM1Q5H8C1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
FREM1Q5H8C1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FREM1Q5H8C1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.74■■□□□ 1.07
FREM1Q5H8C1 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
FREM1Q5H8C1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.74■■□□□ 1.07
FREM1Q5H8C1 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
FREM1Q5H8C1 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FREM1Q5H8C1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.73■■□□□ 1.07
FREM1Q5H8C1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
FREM1Q5H8C1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
FREM1Q5H8C1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
FREM1Q5H8C1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
FREM1Q5H8C1 AC007029.1-201ENST00000604183 313 ntBASIC21.72■■□□□ 1.07
FREM1Q5H8C1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
FREM1Q5H8C1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
FREM1Q5H8C1 SMPD5-203ENST00000639008 1464 ntBASIC21.72■■□□□ 1.07
FREM1Q5H8C1 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
FREM1Q5H8C1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
FREM1Q5H8C1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
FREM1Q5H8C1 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.71■■□□□ 1.07
FREM1Q5H8C1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
FREM1Q5H8C1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
FREM1Q5H8C1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
FREM1Q5H8C1 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FREM1Q5H8C1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.7■■□□□ 1.06
FREM1Q5H8C1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FREM1Q5H8C1 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
FREM1Q5H8C1 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.7■■□□□ 1.06
FREM1Q5H8C1 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.7■■□□□ 1.06
FREM1Q5H8C1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
FREM1Q5H8C1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
FREM1Q5H8C1 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
FREM1Q5H8C1 AC133552.2-201ENST00000619106 1032 ntBASIC21.7■■□□□ 1.06
FREM1Q5H8C1 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
FREM1Q5H8C1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
FREM1Q5H8C1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
FREM1Q5H8C1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
FREM1Q5H8C1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
FREM1Q5H8C1 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
FREM1Q5H8C1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
FREM1Q5H8C1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
FREM1Q5H8C1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.68■■□□□ 1.06
FREM1Q5H8C1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FREM1Q5H8C1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.68■■□□□ 1.06
FREM1Q5H8C1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
FREM1Q5H8C1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
FREM1Q5H8C1 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
FREM1Q5H8C1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.68■■□□□ 1.06
FREM1Q5H8C1 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.67■■□□□ 1.06
FREM1Q5H8C1 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC21.67■■□□□ 1.06
FREM1Q5H8C1 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FREM1Q5H8C1 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
FREM1Q5H8C1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
FREM1Q5H8C1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
FREM1Q5H8C1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.66■■□□□ 1.06
FREM1Q5H8C1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
FREM1Q5H8C1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
FREM1Q5H8C1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.65■■□□□ 1.06
FREM1Q5H8C1 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
FREM1Q5H8C1 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
FREM1Q5H8C1 U85056.1-201ENST00000616429 682 ntBASIC21.64■■□□□ 1.06
FREM1Q5H8C1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
FREM1Q5H8C1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
FREM1Q5H8C1 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.64■■□□□ 1.05
FREM1Q5H8C1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
FREM1Q5H8C1 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
FREM1Q5H8C1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
FREM1Q5H8C1 AC009831.1-201ENST00000580420 1582 ntBASIC21.63■■□□□ 1.05
FREM1Q5H8C1 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FREM1Q5H8C1 AC012354.3-201ENST00000623734 483 ntBASIC21.63■■□□□ 1.05
FREM1Q5H8C1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
FREM1Q5H8C1 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
FREM1Q5H8C1 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.63■■□□□ 1.05
FREM1Q5H8C1 AL592293.1-201ENST00000502889 1188 ntBASIC21.63■■□□□ 1.05
FREM1Q5H8C1 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.63■■□□□ 1.05
FREM1Q5H8C1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.62■■□□□ 1.05
FREM1Q5H8C1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FREM1Q5H8C1 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
FREM1Q5H8C1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
FREM1Q5H8C1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FREM1Q5H8C1 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
FREM1Q5H8C1 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
FREM1Q5H8C1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
FREM1Q5H8C1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC21.6■■□□□ 1.05
FREM1Q5H8C1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
FREM1Q5H8C1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
FREM1Q5H8C1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FREM1Q5H8C1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
FREM1Q5H8C1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
FREM1Q5H8C1 AL121749.1-202ENST00000609313 2153 ntBASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms