Protein–RNA interactions for Protein: P09619

PDGFRB, Platelet-derived growth factor receptor beta, humanhuman

Predictions only

Length 1,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRBP09619 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PDGFRBP09619 U85056.1-201ENST00000616429 682 ntBASIC26.21■■□□□ 1.79
PDGFRBP09619 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.2■■□□□ 1.78
PDGFRBP09619 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PDGFRBP09619 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDGFRBP09619 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
PDGFRBP09619 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDGFRBP09619 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDGFRBP09619 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDGFRBP09619 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDGFRBP09619 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDGFRBP09619 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
PDGFRBP09619 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.18■■□□□ 1.78
PDGFRBP09619 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PDGFRBP09619 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDGFRBP09619 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
PDGFRBP09619 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC26.17■■□□□ 1.78
PDGFRBP09619 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.17■■□□□ 1.78
PDGFRBP09619 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDGFRBP09619 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.17■■□□□ 1.78
PDGFRBP09619 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.17■■□□□ 1.78
PDGFRBP09619 NTF6A-201ENST00000591175 560 ntBASIC26.17■■□□□ 1.78
PDGFRBP09619 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.17■■□□□ 1.78
PDGFRBP09619 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PDGFRBP09619 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.17■■□□□ 1.78
PDGFRBP09619 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDGFRBP09619 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
PDGFRBP09619 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.16■■□□□ 1.78
PDGFRBP09619 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
PDGFRBP09619 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
PDGFRBP09619 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
PDGFRBP09619 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.15■■□□□ 1.78
PDGFRBP09619 RP9P-202ENST00000450133 1212 ntBASIC26.15■■□□□ 1.78
PDGFRBP09619 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC26.15■■□□□ 1.78
PDGFRBP09619 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
PDGFRBP09619 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
PDGFRBP09619 MIR3960-201ENST00000583311 91 ntBASIC26.14■■□□□ 1.78
PDGFRBP09619 AP004609.3-201ENST00000610705 1884 ntBASIC26.14■■□□□ 1.78
PDGFRBP09619 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.77
PDGFRBP09619 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
PDGFRBP09619 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.77
PDGFRBP09619 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
PDGFRBP09619 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
PDGFRBP09619 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
PDGFRBP09619 AC093536.1-201ENST00000569153 554 ntBASIC26.13■■□□□ 1.77
PDGFRBP09619 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PDGFRBP09619 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.13■■□□□ 1.77
PDGFRBP09619 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
PDGFRBP09619 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
PDGFRBP09619 AC133552.2-201ENST00000619106 1032 ntBASIC26.12■■□□□ 1.77
PDGFRBP09619 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PDGFRBP09619 AC009831.1-201ENST00000580420 1582 ntBASIC26.12■■□□□ 1.77
PDGFRBP09619 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
PDGFRBP09619 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
PDGFRBP09619 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.11■■□□□ 1.77
PDGFRBP09619 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PDGFRBP09619 AC026202.3-201ENST00000600805 1127 ntBASIC26.11■■□□□ 1.77
PDGFRBP09619 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
PDGFRBP09619 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
PDGFRBP09619 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
PDGFRBP09619 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC26.1■■□□□ 1.77
PDGFRBP09619 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.09■■□□□ 1.77
PDGFRBP09619 AC142472.1-201ENST00000612013 1741 ntBASIC26.09■■□□□ 1.77
PDGFRBP09619 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PDGFRBP09619 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC26.09■■□□□ 1.77
PDGFRBP09619 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
PDGFRBP09619 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PDGFRBP09619 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.08■■□□□ 1.77
PDGFRBP09619 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
PDGFRBP09619 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PDGFRBP09619 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.08■■□□□ 1.77
PDGFRBP09619 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
PDGFRBP09619 GFER-205ENST00000569451 517 ntTSL 5 BASIC26.08■■□□□ 1.77
PDGFRBP09619 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
PDGFRBP09619 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
PDGFRBP09619 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.08■■□□□ 1.76
PDGFRBP09619 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.76
PDGFRBP09619 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
PDGFRBP09619 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
PDGFRBP09619 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.07■■□□□ 1.76
PDGFRBP09619 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.07■■□□□ 1.76
PDGFRBP09619 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
PDGFRBP09619 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
PDGFRBP09619 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PDGFRBP09619 KRT18P60-201ENST00000312876 1297 ntBASIC26.07■■□□□ 1.76
PDGFRBP09619 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
PDGFRBP09619 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PDGFRBP09619 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
PDGFRBP09619 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PDGFRBP09619 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDGFRBP09619 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
PDGFRBP09619 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.05■■□□□ 1.76
PDGFRBP09619 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDGFRBP09619 AL592293.1-201ENST00000502889 1188 ntBASIC26.05■■□□□ 1.76
PDGFRBP09619 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDGFRBP09619 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PDGFRBP09619 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
PDGFRBP09619 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PDGFRBP09619 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.04■■□□□ 1.76
PDGFRBP09619 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 165 ms