Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HTR1AP08908 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HTR1AP08908 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
HTR1AP08908 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
HTR1AP08908 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HTR1AP08908 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.34■■□□□ 1.17
HTR1AP08908 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HTR1AP08908 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HTR1AP08908 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HTR1AP08908 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.33■■□□□ 1.17
HTR1AP08908 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
HTR1AP08908 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HTR1AP08908 AC136428.2-201ENST00000563187 214 ntBASIC22.33■■□□□ 1.17
HTR1AP08908 AC097358.2-201ENST00000607541 1159 ntBASIC22.33■■□□□ 1.17
HTR1AP08908 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
HTR1AP08908 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
HTR1AP08908 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HTR1AP08908 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HTR1AP08908 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HTR1AP08908 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
HTR1AP08908 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
HTR1AP08908 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.31■■□□□ 1.16
HTR1AP08908 AC138932.3-201ENST00000567634 1902 ntBASIC22.31■■□□□ 1.16
HTR1AP08908 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
HTR1AP08908 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HTR1AP08908 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
HTR1AP08908 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HTR1AP08908 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HTR1AP08908 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
HTR1AP08908 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HTR1AP08908 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HTR1AP08908 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
HTR1AP08908 AC135983.2-203ENST00000454486 1613 ntBASIC22.3■■□□□ 1.16
HTR1AP08908 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HTR1AP08908 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.3■■□□□ 1.16
HTR1AP08908 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
HTR1AP08908 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
HTR1AP08908 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HTR1AP08908 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
HTR1AP08908 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.29■■□□□ 1.16
HTR1AP08908 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
HTR1AP08908 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
HTR1AP08908 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
HTR1AP08908 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
HTR1AP08908 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC22.28■■□□□ 1.16
HTR1AP08908 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HTR1AP08908 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
HTR1AP08908 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HTR1AP08908 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
HTR1AP08908 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HTR1AP08908 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
HTR1AP08908 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.26■■□□□ 1.15
HTR1AP08908 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HTR1AP08908 MIR762-201ENST00000390236 83 ntBASIC22.26■■□□□ 1.15
HTR1AP08908 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.26■■□□□ 1.15
HTR1AP08908 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.26■■□□□ 1.15
HTR1AP08908 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.26■■□□□ 1.15
HTR1AP08908 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HTR1AP08908 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HTR1AP08908 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
HTR1AP08908 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
HTR1AP08908 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
HTR1AP08908 AC142472.1-201ENST00000612013 1741 ntBASIC22.25■■□□□ 1.15
HTR1AP08908 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
HTR1AP08908 AC022211.4-201ENST00000625094 2161 ntBASIC22.25■■□□□ 1.15
HTR1AP08908 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
HTR1AP08908 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
HTR1AP08908 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HTR1AP08908 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.24■■□□□ 1.15
HTR1AP08908 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
HTR1AP08908 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HTR1AP08908 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HTR1AP08908 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HTR1AP08908 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
HTR1AP08908 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HTR1AP08908 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.23■■□□□ 1.15
HTR1AP08908 WHAMMP2-203ENST00000563942 1603 ntBASIC22.23■■□□□ 1.15
HTR1AP08908 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HTR1AP08908 AC010501.1-201ENST00000606270 1962 ntBASIC22.23■■□□□ 1.15
HTR1AP08908 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
HTR1AP08908 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
HTR1AP08908 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HTR1AP08908 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HTR1AP08908 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
HTR1AP08908 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.22■■□□□ 1.15
HTR1AP08908 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.22■■□□□ 1.15
HTR1AP08908 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HTR1AP08908 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HTR1AP08908 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.21■■□□□ 1.15
HTR1AP08908 AC012676.1-201ENST00000574705 1949 ntBASIC22.21■■□□□ 1.15
HTR1AP08908 CASK-201ENST00000378154 2494 ntTSL 5 BASIC22.21■■□□□ 1.15
HTR1AP08908 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
HTR1AP08908 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
HTR1AP08908 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
HTR1AP08908 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
HTR1AP08908 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.2■■□□□ 1.14
HTR1AP08908 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.2■■□□□ 1.14
HTR1AP08908 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.2■■□□□ 1.14
HTR1AP08908 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.2■■□□□ 1.14
HTR1AP08908 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms