Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.87■■□□□ 1.25
PDGFAP04085 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC22.87■■□□□ 1.25
PDGFAP04085 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
PDGFAP04085 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.87■■□□□ 1.25
PDGFAP04085 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PDGFAP04085 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDGFAP04085 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDGFAP04085 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDGFAP04085 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDGFAP04085 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PDGFAP04085 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC22.86■■□□□ 1.25
PDGFAP04085 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.86■■□□□ 1.25
PDGFAP04085 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.86■■□□□ 1.25
PDGFAP04085 AL592295.1-201ENST00000400984 884 ntBASIC22.85■■□□□ 1.25
PDGFAP04085 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDGFAP04085 AC103834.1-201ENST00000520383 144 ntBASIC22.85■■□□□ 1.25
PDGFAP04085 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDGFAP04085 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.85■■□□□ 1.25
PDGFAP04085 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDGFAP04085 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDGFAP04085 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDGFAP04085 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDGFAP04085 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDGFAP04085 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDGFAP04085 AC009299.2-201ENST00000482477 511 ntBASIC22.84■■□□□ 1.25
PDGFAP04085 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDGFAP04085 PVT1_1.1-201ENST00000615125 194 ntBASIC22.84■■□□□ 1.25
PDGFAP04085 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDGFAP04085 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
PDGFAP04085 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.83■■□□□ 1.25
PDGFAP04085 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDGFAP04085 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDGFAP04085 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC22.83■■□□□ 1.25
PDGFAP04085 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDGFAP04085 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
PDGFAP04085 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
PDGFAP04085 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
PDGFAP04085 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDGFAP04085 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.82■■□□□ 1.24
PDGFAP04085 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC22.82■■□□□ 1.24
PDGFAP04085 MIR6765-201ENST00000614092 87 ntBASIC22.82■■□□□ 1.24
PDGFAP04085 AC074183.2-201ENST00000623112 922 ntBASIC22.82■■□□□ 1.24
PDGFAP04085 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC22.82■■□□□ 1.24
PDGFAP04085 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC22.81■■□□□ 1.24
PDGFAP04085 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDGFAP04085 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC22.81■■□□□ 1.24
PDGFAP04085 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PDGFAP04085 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDGFAP04085 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.81■■□□□ 1.24
PDGFAP04085 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDGFAP04085 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.81■■□□□ 1.24
PDGFAP04085 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.81■■□□□ 1.24
PDGFAP04085 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
PDGFAP04085 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
PDGFAP04085 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC22.8■■□□□ 1.24
PDGFAP04085 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
PDGFAP04085 AC139795.1-202ENST00000500444 432 ntBASIC22.8■■□□□ 1.24
PDGFAP04085 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
PDGFAP04085 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.8■■□□□ 1.24
PDGFAP04085 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PDGFAP04085 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC22.79■■□□□ 1.24
PDGFAP04085 MIR3960-201ENST00000583311 91 ntBASIC22.79■■□□□ 1.24
PDGFAP04085 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
PDGFAP04085 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.79■■□□□ 1.24
PDGFAP04085 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
PDGFAP04085 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
PDGFAP04085 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
PDGFAP04085 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PDGFAP04085 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PDGFAP04085 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
PDGFAP04085 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
PDGFAP04085 YBX1P4-201ENST00000392794 808 ntBASIC22.76■■□□□ 1.23
PDGFAP04085 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.76■■□□□ 1.23
PDGFAP04085 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.76■■□□□ 1.23
PDGFAP04085 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.76■■□□□ 1.23
PDGFAP04085 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.75■■□□□ 1.23
PDGFAP04085 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
PDGFAP04085 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
PDGFAP04085 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
PDGFAP04085 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.74■■□□□ 1.23
PDGFAP04085 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.74■■□□□ 1.23
PDGFAP04085 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC22.74■■□□□ 1.23
PDGFAP04085 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC22.74■■□□□ 1.23
PDGFAP04085 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.74■■□□□ 1.23
PDGFAP04085 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.74■■□□□ 1.23
PDGFAP04085 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
PDGFAP04085 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
PDGFAP04085 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PDGFAP04085 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
PDGFAP04085 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
PDGFAP04085 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC22.73■■□□□ 1.23
PDGFAP04085 AC018755.3-202ENST00000596210 929 ntBASIC22.73■■□□□ 1.23
PDGFAP04085 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
PDGFAP04085 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
PDGFAP04085 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PDGFAP04085 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PDGFAP04085 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PDGFAP04085 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.72■■□□□ 1.23
PDGFAP04085 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
PDGFAP04085 AL139393.2-201ENST00000608721 2025 ntBASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms