Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC30■■■□□ 2.39
COL1A1P02452 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC30■■■□□ 2.39
COL1A1P02452 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
COL1A1P02452 LINC01003-201ENST00000564834 1764 ntBASIC30■■■□□ 2.39
COL1A1P02452 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
COL1A1P02452 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC29.99■■■□□ 2.39
COL1A1P02452 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC29.99■■■□□ 2.39
COL1A1P02452 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
COL1A1P02452 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC29.99■■■□□ 2.39
COL1A1P02452 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC29.99■■■□□ 2.39
COL1A1P02452 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC29.99■■■□□ 2.39
COL1A1P02452 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
COL1A1P02452 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
COL1A1P02452 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
COL1A1P02452 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC29.98■■■□□ 2.39
COL1A1P02452 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
COL1A1P02452 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
COL1A1P02452 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
COL1A1P02452 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
COL1A1P02452 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
COL1A1P02452 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC29.98■■■□□ 2.39
COL1A1P02452 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC29.98■■■□□ 2.39
COL1A1P02452 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC29.98■■■□□ 2.39
COL1A1P02452 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
COL1A1P02452 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
COL1A1P02452 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
COL1A1P02452 DUX4L9-201ENST00000449051 1259 ntBASIC29.97■■■□□ 2.39
COL1A1P02452 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
COL1A1P02452 MIR3960-201ENST00000583311 91 ntBASIC29.97■■■□□ 2.39
COL1A1P02452 AL451085.2-201ENST00000605085 799 ntBASIC29.97■■■□□ 2.39
COL1A1P02452 AL035685.1-201ENST00000636663 812 ntBASIC29.97■■■□□ 2.39
COL1A1P02452 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC29.97■■■□□ 2.39
COL1A1P02452 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC29.96■■■□□ 2.39
COL1A1P02452 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC29.96■■■□□ 2.39
COL1A1P02452 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC29.96■■■□□ 2.39
COL1A1P02452 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
COL1A1P02452 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
COL1A1P02452 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.38
COL1A1P02452 AL449106.1-201ENST00000608517 1980 ntBASIC29.94■■■□□ 2.38
COL1A1P02452 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC29.94■■■□□ 2.38
COL1A1P02452 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
COL1A1P02452 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC29.94■■■□□ 2.38
COL1A1P02452 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
COL1A1P02452 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC29.93■■■□□ 2.38
COL1A1P02452 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
COL1A1P02452 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC29.93■■■□□ 2.38
COL1A1P02452 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
COL1A1P02452 DUX4L18-201ENST00000553347 1267 ntBASIC29.93■■■□□ 2.38
COL1A1P02452 TRIR-205ENST00000592273 783 ntTSL 3 BASIC29.93■■■□□ 2.38
COL1A1P02452 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
COL1A1P02452 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
COL1A1P02452 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC29.92■■■□□ 2.38
COL1A1P02452 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC29.92■■■□□ 2.38
COL1A1P02452 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC29.92■■■□□ 2.38
COL1A1P02452 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC29.91■■■□□ 2.38
COL1A1P02452 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
COL1A1P02452 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC29.9■■■□□ 2.38
COL1A1P02452 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
COL1A1P02452 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
COL1A1P02452 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
COL1A1P02452 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
COL1A1P02452 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC29.88■■■□□ 2.37
COL1A1P02452 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC29.88■■■□□ 2.37
COL1A1P02452 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
COL1A1P02452 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
COL1A1P02452 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
COL1A1P02452 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC29.87■■■□□ 2.37
COL1A1P02452 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC29.87■■■□□ 2.37
COL1A1P02452 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC29.87■■■□□ 2.37
COL1A1P02452 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
COL1A1P02452 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
COL1A1P02452 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC29.86■■■□□ 2.37
COL1A1P02452 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC29.86■■■□□ 2.37
COL1A1P02452 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC29.86■■■□□ 2.37
COL1A1P02452 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
COL1A1P02452 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC29.84■■■□□ 2.37
COL1A1P02452 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
COL1A1P02452 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC29.84■■■□□ 2.37
COL1A1P02452 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
COL1A1P02452 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
COL1A1P02452 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC29.83■■■□□ 2.37
COL1A1P02452 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
COL1A1P02452 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
COL1A1P02452 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.82■■■□□ 2.36
COL1A1P02452 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
COL1A1P02452 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
COL1A1P02452 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC29.81■■■□□ 2.36
COL1A1P02452 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC29.81■■■□□ 2.36
COL1A1P02452 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
COL1A1P02452 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC29.8■■■□□ 2.36
COL1A1P02452 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
COL1A1P02452 SHF-206ENST00000560471 2499 ntTSL 5 BASIC29.8■■■□□ 2.36
COL1A1P02452 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
COL1A1P02452 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
COL1A1P02452 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
COL1A1P02452 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC29.79■■■□□ 2.36
COL1A1P02452 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
COL1A1P02452 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
COL1A1P02452 BX255925.1-201ENST00000566954 1854 ntBASIC29.78■■■□□ 2.36
COL1A1P02452 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms