Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF253O75346 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.89■□□□□ 0.61
ZNF253O75346 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF253O75346 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
ZNF253O75346 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF253O75346 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF253O75346 CIB2-204ENST00000557846 934 ntTSL 3 BASIC18.88■□□□□ 0.61
ZNF253O75346 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
ZNF253O75346 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC18.88■□□□□ 0.61
ZNF253O75346 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF253O75346 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF253O75346 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF253O75346 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF253O75346 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ZNF253O75346 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.87■□□□□ 0.61
ZNF253O75346 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF253O75346 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF253O75346 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF253O75346 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.86■□□□□ 0.61
ZNF253O75346 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ZNF253O75346 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF253O75346 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF253O75346 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ZNF253O75346 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF253O75346 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC18.84■□□□□ 0.61
ZNF253O75346 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF253O75346 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF253O75346 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF253O75346 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.84■□□□□ 0.61
ZNF253O75346 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ZNF253O75346 AP004609.3-201ENST00000610705 1884 ntBASIC18.84■□□□□ 0.61
ZNF253O75346 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF253O75346 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF253O75346 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF253O75346 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.83■□□□□ 0.61
ZNF253O75346 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ZNF253O75346 PEX7-203ENST00000541292 945 ntTSL 5 BASIC18.83■□□□□ 0.6
ZNF253O75346 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ZNF253O75346 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ZNF253O75346 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.83■□□□□ 0.6
ZNF253O75346 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.83■□□□□ 0.6
ZNF253O75346 DUSP8P4-201ENST00000399538 1761 ntBASIC18.83■□□□□ 0.6
ZNF253O75346 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ZNF253O75346 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
ZNF253O75346 AC110285.7-201ENST00000624417 1536 ntBASIC18.82■□□□□ 0.6
ZNF253O75346 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF253O75346 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF253O75346 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ZNF253O75346 AC142472.1-201ENST00000612013 1741 ntBASIC18.8■□□□□ 0.6
ZNF253O75346 AC092803.2-201ENST00000564287 1899 ntBASIC18.8■□□□□ 0.6
ZNF253O75346 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF253O75346 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ZNF253O75346 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF253O75346 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ZNF253O75346 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF253O75346 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF253O75346 AC087741.3-201ENST00000624270 1347 ntBASIC18.79■□□□□ 0.6
ZNF253O75346 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
ZNF253O75346 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.79■□□□□ 0.6
ZNF253O75346 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF253O75346 AC044849.2-201ENST00000606596 710 ntBASIC18.79■□□□□ 0.6
ZNF253O75346 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF253O75346 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ZNF253O75346 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ZNF253O75346 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF253O75346 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ZNF253O75346 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ZNF253O75346 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.77■□□□□ 0.6
ZNF253O75346 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF253O75346 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF253O75346 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ZNF253O75346 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF253O75346 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ZNF253O75346 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.77■□□□□ 0.59
ZNF253O75346 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF253O75346 WHAMMP3-201ENST00000611636 1609 ntBASIC18.76■□□□□ 0.59
ZNF253O75346 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF253O75346 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ZNF253O75346 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
ZNF253O75346 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF253O75346 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ZNF253O75346 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF253O75346 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF253O75346 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF253O75346 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF253O75346 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC18.74■□□□□ 0.59
ZNF253O75346 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ZNF253O75346 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
ZNF253O75346 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ZNF253O75346 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF253O75346 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF253O75346 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF253O75346 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF253O75346 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC18.73■□□□□ 0.59
ZNF253O75346 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ZNF253O75346 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ZNF253O75346 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC18.73■□□□□ 0.59
ZNF253O75346 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF253O75346 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF253O75346 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms