Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NPHS1O60500 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NPHS1O60500 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.93■■□□□ 1.42
NPHS1O60500 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NPHS1O60500 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.92■■□□□ 1.42
NPHS1O60500 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.92■■□□□ 1.42
NPHS1O60500 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NPHS1O60500 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
NPHS1O60500 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NPHS1O60500 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NPHS1O60500 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NPHS1O60500 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
NPHS1O60500 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NPHS1O60500 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
NPHS1O60500 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
NPHS1O60500 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.9■■□□□ 1.42
NPHS1O60500 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NPHS1O60500 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
NPHS1O60500 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
NPHS1O60500 ERN1-208ENST00000606895 2068 ntBASIC23.9■■□□□ 1.42
NPHS1O60500 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
NPHS1O60500 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
NPHS1O60500 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
NPHS1O60500 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
NPHS1O60500 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.88■■□□□ 1.41
NPHS1O60500 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.88■■□□□ 1.41
NPHS1O60500 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NPHS1O60500 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NPHS1O60500 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NPHS1O60500 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NPHS1O60500 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.87■■□□□ 1.41
NPHS1O60500 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.87■■□□□ 1.41
NPHS1O60500 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NPHS1O60500 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.87■■□□□ 1.41
NPHS1O60500 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.87■■□□□ 1.41
NPHS1O60500 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NPHS1O60500 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NPHS1O60500 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NPHS1O60500 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NPHS1O60500 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.86■■□□□ 1.41
NPHS1O60500 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NPHS1O60500 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NPHS1O60500 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NPHS1O60500 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NPHS1O60500 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
NPHS1O60500 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.84■■□□□ 1.41
NPHS1O60500 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.84■■□□□ 1.41
NPHS1O60500 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NPHS1O60500 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
NPHS1O60500 AC093323.1-202ENST00000635031 2045 ntBASIC23.83■■□□□ 1.41
NPHS1O60500 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.83■■□□□ 1.41
NPHS1O60500 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.83■■□□□ 1.41
NPHS1O60500 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
NPHS1O60500 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NPHS1O60500 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.82■■□□□ 1.4
NPHS1O60500 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NPHS1O60500 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NPHS1O60500 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NPHS1O60500 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
NPHS1O60500 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.82■■□□□ 1.4
NPHS1O60500 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
NPHS1O60500 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.81■■□□□ 1.4
NPHS1O60500 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
NPHS1O60500 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
NPHS1O60500 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.8■■□□□ 1.4
NPHS1O60500 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
NPHS1O60500 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
NPHS1O60500 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NPHS1O60500 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.79■■□□□ 1.4
NPHS1O60500 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NPHS1O60500 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
NPHS1O60500 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NPHS1O60500 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NPHS1O60500 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NPHS1O60500 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
NPHS1O60500 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.78■■□□□ 1.4
NPHS1O60500 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NPHS1O60500 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NPHS1O60500 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.77■■□□□ 1.4
NPHS1O60500 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NPHS1O60500 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NPHS1O60500 AC142381.3-201ENST00000568208 1670 ntBASIC23.77■■□□□ 1.4
NPHS1O60500 LINC01971-201ENST00000617888 1048 ntBASIC23.77■■□□□ 1.4
NPHS1O60500 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
NPHS1O60500 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.76■■□□□ 1.39
NPHS1O60500 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.76■■□□□ 1.39
NPHS1O60500 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NPHS1O60500 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NPHS1O60500 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NPHS1O60500 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NPHS1O60500 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NPHS1O60500 AC008813.1-201ENST00000536597 885 ntBASIC23.75■■□□□ 1.39
NPHS1O60500 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NPHS1O60500 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NPHS1O60500 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
NPHS1O60500 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
NPHS1O60500 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
NPHS1O60500 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NPHS1O60500 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
NPHS1O60500 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms