Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
NPHS1O60500 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
NPHS1O60500 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.93■■□□□ 1.42
NPHS1O60500 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NPHS1O60500 CEBPA-AS1-201ENST00000592982 2198 ntBASIC23.92■■□□□ 1.42
NPHS1O60500 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.92■■□□□ 1.42
NPHS1O60500 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NPHS1O60500 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
NPHS1O60500 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NPHS1O60500 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
NPHS1O60500 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
NPHS1O60500 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
NPHS1O60500 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
NPHS1O60500 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
NPHS1O60500 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
NPHS1O60500 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.9■■□□□ 1.42
NPHS1O60500 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NPHS1O60500 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
NPHS1O60500 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
NPHS1O60500 ERN1-208ENST00000606895 2068 ntBASIC23.9■■□□□ 1.42
NPHS1O60500 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
NPHS1O60500 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
NPHS1O60500 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
NPHS1O60500 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
NPHS1O60500 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.88■■□□□ 1.41
NPHS1O60500 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC23.88■■□□□ 1.41
NPHS1O60500 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NPHS1O60500 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NPHS1O60500 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NPHS1O60500 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
NPHS1O60500 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.87■■□□□ 1.41
NPHS1O60500 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.87■■□□□ 1.41
NPHS1O60500 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NPHS1O60500 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.87■■□□□ 1.41
NPHS1O60500 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.87■■□□□ 1.41
NPHS1O60500 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NPHS1O60500 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NPHS1O60500 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NPHS1O60500 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NPHS1O60500 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.86■■□□□ 1.41
NPHS1O60500 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NPHS1O60500 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NPHS1O60500 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
NPHS1O60500 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NPHS1O60500 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
NPHS1O60500 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC23.84■■□□□ 1.41
NPHS1O60500 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.84■■□□□ 1.41
NPHS1O60500 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NPHS1O60500 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.83■■□□□ 1.41
NPHS1O60500 AC093323.1-202ENST00000635031 2045 ntBASIC23.83■■□□□ 1.41
NPHS1O60500 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC23.83■■□□□ 1.41
NPHS1O60500 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.83■■□□□ 1.41
NPHS1O60500 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
NPHS1O60500 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NPHS1O60500 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC23.82■■□□□ 1.4
NPHS1O60500 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NPHS1O60500 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NPHS1O60500 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NPHS1O60500 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
NPHS1O60500 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC23.82■■□□□ 1.4
NPHS1O60500 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
NPHS1O60500 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC23.81■■□□□ 1.4
NPHS1O60500 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
NPHS1O60500 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
NPHS1O60500 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC23.8■■□□□ 1.4
NPHS1O60500 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
NPHS1O60500 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
NPHS1O60500 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
NPHS1O60500 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.79■■□□□ 1.4
NPHS1O60500 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NPHS1O60500 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
NPHS1O60500 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NPHS1O60500 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
NPHS1O60500 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NPHS1O60500 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
NPHS1O60500 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.78■■□□□ 1.4
NPHS1O60500 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
NPHS1O60500 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
NPHS1O60500 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC23.77■■□□□ 1.4
NPHS1O60500 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
NPHS1O60500 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
NPHS1O60500 AC142381.3-201ENST00000568208 1670 ntBASIC23.77■■□□□ 1.4
NPHS1O60500 LINC01971-201ENST00000617888 1048 ntBASIC23.77■■□□□ 1.4
NPHS1O60500 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.76■■□□□ 1.39
NPHS1O60500 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.76■■□□□ 1.39
NPHS1O60500 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.76■■□□□ 1.39
NPHS1O60500 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
NPHS1O60500 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NPHS1O60500 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NPHS1O60500 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NPHS1O60500 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NPHS1O60500 AC008813.1-201ENST00000536597 885 ntBASIC23.75■■□□□ 1.39
NPHS1O60500 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NPHS1O60500 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NPHS1O60500 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.74■■□□□ 1.39
NPHS1O60500 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.74■■□□□ 1.39
NPHS1O60500 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
NPHS1O60500 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
NPHS1O60500 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
NPHS1O60500 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms