Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SSNA1O43805 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSNA1O43805 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SSNA1O43805 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
SSNA1O43805 AC142381.3-201ENST00000568208 1670 ntBASIC20.83■□□□□ 0.93
SSNA1O43805 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
SSNA1O43805 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSNA1O43805 PREB-202ENST00000406567 1910 ntTSL 5 BASIC20.83■□□□□ 0.93
SSNA1O43805 AC018358.1-201ENST00000631079 1402 ntBASIC20.83■□□□□ 0.93
SSNA1O43805 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SSNA1O43805 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSNA1O43805 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSNA1O43805 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSNA1O43805 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSNA1O43805 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SSNA1O43805 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.81■□□□□ 0.92
SSNA1O43805 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.81■□□□□ 0.92
SSNA1O43805 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
SSNA1O43805 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSNA1O43805 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSNA1O43805 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SSNA1O43805 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.8■□□□□ 0.92
SSNA1O43805 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSNA1O43805 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSNA1O43805 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC20.79■□□□□ 0.92
SSNA1O43805 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSNA1O43805 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSNA1O43805 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSNA1O43805 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSNA1O43805 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SSNA1O43805 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC20.78■□□□□ 0.92
SSNA1O43805 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.78■□□□□ 0.92
SSNA1O43805 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SSNA1O43805 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SSNA1O43805 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SSNA1O43805 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
SSNA1O43805 AP004609.3-201ENST00000610705 1884 ntBASIC20.77■□□□□ 0.92
SSNA1O43805 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSNA1O43805 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SSNA1O43805 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.77■□□□□ 0.92
SSNA1O43805 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SSNA1O43805 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
SSNA1O43805 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
SSNA1O43805 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.77■□□□□ 0.91
SSNA1O43805 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSNA1O43805 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSNA1O43805 AL139125.2-201ENST00000623134 1869 ntBASIC20.76■□□□□ 0.91
SSNA1O43805 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSNA1O43805 DYNLL1-208ENST00000550178 581 ntBASIC20.76■□□□□ 0.91
SSNA1O43805 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SSNA1O43805 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSNA1O43805 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SSNA1O43805 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSNA1O43805 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC20.75■□□□□ 0.91
SSNA1O43805 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSNA1O43805 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSNA1O43805 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSNA1O43805 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SSNA1O43805 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SSNA1O43805 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSNA1O43805 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSNA1O43805 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
SSNA1O43805 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SSNA1O43805 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
SSNA1O43805 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.73■□□□□ 0.91
SSNA1O43805 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SSNA1O43805 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.73■□□□□ 0.91
SSNA1O43805 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
SSNA1O43805 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSNA1O43805 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSNA1O43805 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.72■□□□□ 0.91
SSNA1O43805 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSNA1O43805 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSNA1O43805 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSNA1O43805 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SSNA1O43805 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SSNA1O43805 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSNA1O43805 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSNA1O43805 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSNA1O43805 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSNA1O43805 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.71■□□□□ 0.91
SSNA1O43805 LINC00543-201ENST00000567234 1845 ntBASIC20.71■□□□□ 0.91
SSNA1O43805 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SSNA1O43805 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.71■□□□□ 0.91
SSNA1O43805 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SSNA1O43805 AC079834.2-201ENST00000609776 1949 ntBASIC20.7■□□□□ 0.91
SSNA1O43805 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SSNA1O43805 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSNA1O43805 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSNA1O43805 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSNA1O43805 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.7■□□□□ 0.9
SSNA1O43805 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSNA1O43805 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSNA1O43805 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSNA1O43805 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSNA1O43805 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSNA1O43805 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSNA1O43805 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SSNA1O43805 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSNA1O43805 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms