Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.36■■□□□ 1.33
RRP8O43159 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RRP8O43159 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
RRP8O43159 Z92544.1-202ENST00000571933 1220 ntBASIC23.35■■□□□ 1.33
RRP8O43159 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
RRP8O43159 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
RRP8O43159 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RRP8O43159 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
RRP8O43159 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.34■■□□□ 1.33
RRP8O43159 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RRP8O43159 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC23.34■■□□□ 1.33
RRP8O43159 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
RRP8O43159 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
RRP8O43159 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.32■■□□□ 1.32
RRP8O43159 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
RRP8O43159 TK2-216ENST00000564917 1156 ntTSL 3 BASIC23.32■■□□□ 1.32
RRP8O43159 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
RRP8O43159 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC23.31■■□□□ 1.32
RRP8O43159 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RRP8O43159 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC23.31■■□□□ 1.32
RRP8O43159 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RRP8O43159 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.3■■□□□ 1.32
RRP8O43159 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RRP8O43159 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RRP8O43159 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC23.29■■□□□ 1.32
RRP8O43159 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.29■■□□□ 1.32
RRP8O43159 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RRP8O43159 AC019171.1-201ENST00000601251 1056 ntBASIC23.28■■□□□ 1.32
RRP8O43159 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.27■■□□□ 1.32
RRP8O43159 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RRP8O43159 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.26■■□□□ 1.31
RRP8O43159 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RRP8O43159 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.26■■□□□ 1.31
RRP8O43159 KRT125P-201ENST00000546827 989 ntBASIC23.26■■□□□ 1.31
RRP8O43159 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
RRP8O43159 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RRP8O43159 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RRP8O43159 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.25■■□□□ 1.31
RRP8O43159 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.25■■□□□ 1.31
RRP8O43159 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RRP8O43159 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
RRP8O43159 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RRP8O43159 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.24■■□□□ 1.31
RRP8O43159 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.24■■□□□ 1.31
RRP8O43159 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RRP8O43159 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RRP8O43159 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
RRP8O43159 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
RRP8O43159 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC23.23■■□□□ 1.31
RRP8O43159 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.23■■□□□ 1.31
RRP8O43159 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC23.23■■□□□ 1.31
RRP8O43159 AP004833.2-201ENST00000532228 1454 ntBASIC23.23■■□□□ 1.31
RRP8O43159 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RRP8O43159 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC23.22■■□□□ 1.31
RRP8O43159 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
RRP8O43159 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RRP8O43159 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.22■■□□□ 1.31
RRP8O43159 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.21■■□□□ 1.31
RRP8O43159 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RRP8O43159 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RRP8O43159 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RRP8O43159 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RRP8O43159 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.2■■□□□ 1.3
RRP8O43159 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC23.2■■□□□ 1.3
RRP8O43159 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
RRP8O43159 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
RRP8O43159 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RRP8O43159 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RRP8O43159 MIR638-201ENST00000385237 100 ntBASIC23.19■■□□□ 1.3
RRP8O43159 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.19■■□□□ 1.3
RRP8O43159 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.19■■□□□ 1.3
RRP8O43159 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.18■■□□□ 1.3
RRP8O43159 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.18■■□□□ 1.3
RRP8O43159 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RRP8O43159 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.17■■□□□ 1.3
RRP8O43159 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RRP8O43159 BX664725.1-201ENST00000438252 379 ntBASIC23.17■■□□□ 1.3
RRP8O43159 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.17■■□□□ 1.3
RRP8O43159 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.17■■□□□ 1.3
RRP8O43159 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.17■■□□□ 1.3
RRP8O43159 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.16■■□□□ 1.3
RRP8O43159 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.16■■□□□ 1.3
RRP8O43159 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RRP8O43159 MIR4787-201ENST00000607364 84 ntBASIC23.16■■□□□ 1.3
RRP8O43159 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RRP8O43159 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RRP8O43159 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RRP8O43159 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RRP8O43159 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RRP8O43159 LONRF2P2-201ENST00000439212 571 ntBASIC23.15■■□□□ 1.3
RRP8O43159 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RRP8O43159 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RRP8O43159 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RRP8O43159 KRT16P3-201ENST00000439127 1283 ntBASIC23.14■■□□□ 1.29
RRP8O43159 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC23.14■■□□□ 1.29
RRP8O43159 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC23.14■■□□□ 1.29
RRP8O43159 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RRP8O43159 AC100797.4-201ENST00000631653 1827 ntBASIC23.14■■□□□ 1.29
RRP8O43159 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RRP8O43159 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms