Protein–RNA interactions for Protein: O15297

PPM1D, Protein phosphatase 1D, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1DO15297 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24■■□□□ 1.43
PPM1DO15297 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
PPM1DO15297 LINC01003-201ENST00000564834 1764 ntBASIC24■■□□□ 1.43
PPM1DO15297 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.99■■□□□ 1.43
PPM1DO15297 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
PPM1DO15297 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
PPM1DO15297 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.99■■□□□ 1.43
PPM1DO15297 AC093536.1-201ENST00000569153 554 ntBASIC23.99■■□□□ 1.43
PPM1DO15297 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC23.99■■□□□ 1.43
PPM1DO15297 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PPM1DO15297 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
PPM1DO15297 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PPM1DO15297 AL359504.2-201ENST00000605506 1601 ntBASIC23.99■■□□□ 1.43
PPM1DO15297 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PPM1DO15297 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
PPM1DO15297 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PPM1DO15297 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
PPM1DO15297 GUK1-208ENST00000366728 842 ntTSL 2 BASIC23.97■■□□□ 1.43
PPM1DO15297 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PPM1DO15297 BX255925.1-201ENST00000566954 1854 ntBASIC23.96■■□□□ 1.43
PPM1DO15297 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
PPM1DO15297 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PPM1DO15297 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PPM1DO15297 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC23.96■■□□□ 1.43
PPM1DO15297 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.96■■□□□ 1.43
PPM1DO15297 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PPM1DO15297 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.95■■□□□ 1.43
PPM1DO15297 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
PPM1DO15297 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC23.95■■□□□ 1.42
PPM1DO15297 MIR3960-201ENST00000583311 91 ntBASIC23.95■■□□□ 1.42
PPM1DO15297 RAP2CP1-202ENST00000605179 643 ntBASIC23.95■■□□□ 1.42
PPM1DO15297 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PPM1DO15297 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC23.95■■□□□ 1.42
PPM1DO15297 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
PPM1DO15297 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
PPM1DO15297 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PPM1DO15297 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PPM1DO15297 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
PPM1DO15297 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PPM1DO15297 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.94■■□□□ 1.42
PPM1DO15297 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PPM1DO15297 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PPM1DO15297 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
PPM1DO15297 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC23.94■■□□□ 1.42
PPM1DO15297 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
PPM1DO15297 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
PPM1DO15297 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PPM1DO15297 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PPM1DO15297 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PPM1DO15297 DUX4L18-201ENST00000553347 1267 ntBASIC23.93■■□□□ 1.42
PPM1DO15297 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
PPM1DO15297 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PPM1DO15297 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
PPM1DO15297 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.91■■□□□ 1.42
PPM1DO15297 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC23.9■■□□□ 1.42
PPM1DO15297 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PPM1DO15297 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
PPM1DO15297 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PPM1DO15297 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
PPM1DO15297 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
PPM1DO15297 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PPM1DO15297 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PPM1DO15297 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.89■■□□□ 1.41
PPM1DO15297 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PPM1DO15297 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PPM1DO15297 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PPM1DO15297 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PPM1DO15297 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC23.88■■□□□ 1.41
PPM1DO15297 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PPM1DO15297 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PPM1DO15297 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PPM1DO15297 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.87■■□□□ 1.41
PPM1DO15297 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PPM1DO15297 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PPM1DO15297 DUX4L9-201ENST00000449051 1259 ntBASIC23.86■■□□□ 1.41
PPM1DO15297 SPCS2P3-201ENST00000500401 656 ntBASIC23.86■■□□□ 1.41
PPM1DO15297 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PPM1DO15297 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
PPM1DO15297 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PPM1DO15297 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PPM1DO15297 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.85■■□□□ 1.41
PPM1DO15297 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PPM1DO15297 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC23.84■■□□□ 1.41
PPM1DO15297 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PPM1DO15297 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PPM1DO15297 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PPM1DO15297 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.84■■□□□ 1.41
PPM1DO15297 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC23.84■■□□□ 1.41
PPM1DO15297 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC23.84■■□□□ 1.41
PPM1DO15297 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PPM1DO15297 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.83■■□□□ 1.41
PPM1DO15297 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PPM1DO15297 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC23.83■■□□□ 1.41
PPM1DO15297 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.83■■□□□ 1.41
PPM1DO15297 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.83■■□□□ 1.41
PPM1DO15297 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PPM1DO15297 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC23.83■■□□□ 1.4
PPM1DO15297 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC23.82■■□□□ 1.4
PPM1DO15297 AL449106.1-201ENST00000608517 1980 ntBASIC23.82■■□□□ 1.4
PPM1DO15297 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms