Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC24.4■■□□□ 1.5
TLR4O00206 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
TLR4O00206 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.5
TLR4O00206 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
TLR4O00206 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
TLR4O00206 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC24.39■■□□□ 1.49
TLR4O00206 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
TLR4O00206 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
TLR4O00206 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TLR4O00206 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.38■■□□□ 1.49
TLR4O00206 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
TLR4O00206 AL359504.2-201ENST00000605506 1601 ntBASIC24.38■■□□□ 1.49
TLR4O00206 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.37■■□□□ 1.49
TLR4O00206 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC24.37■■□□□ 1.49
TLR4O00206 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
TLR4O00206 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
TLR4O00206 MIR6765-201ENST00000614092 87 ntBASIC24.37■■□□□ 1.49
TLR4O00206 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.37■■□□□ 1.49
TLR4O00206 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
TLR4O00206 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
TLR4O00206 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
TLR4O00206 AC074183.2-201ENST00000623112 922 ntBASIC24.36■■□□□ 1.49
TLR4O00206 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
TLR4O00206 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.35■■□□□ 1.49
TLR4O00206 AC018755.3-202ENST00000596210 929 ntBASIC24.35■■□□□ 1.49
TLR4O00206 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.35■■□□□ 1.49
TLR4O00206 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TLR4O00206 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.34■■□□□ 1.49
TLR4O00206 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.34■■□□□ 1.49
TLR4O00206 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
TLR4O00206 AC010980.1-201ENST00000587192 1142 ntBASIC24.34■■□□□ 1.49
TLR4O00206 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
TLR4O00206 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.34■■□□□ 1.49
TLR4O00206 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC24.33■■□□□ 1.49
TLR4O00206 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
TLR4O00206 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
TLR4O00206 WHAMMP3-201ENST00000611636 1609 ntBASIC24.33■■□□□ 1.49
TLR4O00206 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
TLR4O00206 AC139795.1-202ENST00000500444 432 ntBASIC24.33■■□□□ 1.49
TLR4O00206 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC24.33■■□□□ 1.49
TLR4O00206 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TLR4O00206 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
TLR4O00206 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
TLR4O00206 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.32■■□□□ 1.48
TLR4O00206 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
TLR4O00206 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.31■■□□□ 1.48
TLR4O00206 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.31■■□□□ 1.48
TLR4O00206 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.31■■□□□ 1.48
TLR4O00206 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.31■■□□□ 1.48
TLR4O00206 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TLR4O00206 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC24.3■■□□□ 1.48
TLR4O00206 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TLR4O00206 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
TLR4O00206 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TLR4O00206 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
TLR4O00206 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
TLR4O00206 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.29■■□□□ 1.48
TLR4O00206 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
TLR4O00206 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.29■■□□□ 1.48
TLR4O00206 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC24.29■■□□□ 1.48
TLR4O00206 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC24.29■■□□□ 1.48
TLR4O00206 AL035685.1-201ENST00000636663 812 ntBASIC24.29■■□□□ 1.48
TLR4O00206 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.29■■□□□ 1.48
TLR4O00206 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.29■■□□□ 1.48
TLR4O00206 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
TLR4O00206 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.28■■□□□ 1.48
TLR4O00206 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
TLR4O00206 AL451085.2-201ENST00000605085 799 ntBASIC24.28■■□□□ 1.48
TLR4O00206 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.28■■□□□ 1.48
TLR4O00206 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
TLR4O00206 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TLR4O00206 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
TLR4O00206 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TLR4O00206 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TLR4O00206 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
TLR4O00206 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
TLR4O00206 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
TLR4O00206 KRT8P33-201ENST00000508125 1423 ntBASIC24.27■■□□□ 1.48
TLR4O00206 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TLR4O00206 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TLR4O00206 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.26■■□□□ 1.47
TLR4O00206 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TLR4O00206 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.26■■□□□ 1.47
TLR4O00206 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TLR4O00206 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TLR4O00206 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
TLR4O00206 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
TLR4O00206 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
TLR4O00206 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
TLR4O00206 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.25■■□□□ 1.47
TLR4O00206 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
TLR4O00206 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
TLR4O00206 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC24.25■■□□□ 1.47
TLR4O00206 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC24.25■■□□□ 1.47
TLR4O00206 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
TLR4O00206 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.24■■□□□ 1.47
TLR4O00206 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
TLR4O00206 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.24■■□□□ 1.47
TLR4O00206 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
TLR4O00206 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 360.7 ms