Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 WHAMMP3-201ENST00000611636 1609 ntBASIC22.47■■□□□ 1.19
HTR3EA5X5Y0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
HTR3EA5X5Y0 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.47■■□□□ 1.19
HTR3EA5X5Y0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.47■■□□□ 1.19
HTR3EA5X5Y0 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HTR3EA5X5Y0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
HTR3EA5X5Y0 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
HTR3EA5X5Y0 LINC00543-201ENST00000567234 1845 ntBASIC22.46■■□□□ 1.19
HTR3EA5X5Y0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HTR3EA5X5Y0 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.46■■□□□ 1.19
HTR3EA5X5Y0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
HTR3EA5X5Y0 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.46■■□□□ 1.19
HTR3EA5X5Y0 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HTR3EA5X5Y0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
HTR3EA5X5Y0 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.45■■□□□ 1.18
HTR3EA5X5Y0 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.45■■□□□ 1.18
HTR3EA5X5Y0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HTR3EA5X5Y0 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HTR3EA5X5Y0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HTR3EA5X5Y0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.44■■□□□ 1.18
HTR3EA5X5Y0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
HTR3EA5X5Y0 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.44■■□□□ 1.18
HTR3EA5X5Y0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.44■■□□□ 1.18
HTR3EA5X5Y0 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.44■■□□□ 1.18
HTR3EA5X5Y0 AC008813.1-201ENST00000536597 885 ntBASIC22.44■■□□□ 1.18
HTR3EA5X5Y0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
HTR3EA5X5Y0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HTR3EA5X5Y0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.43■■□□□ 1.18
HTR3EA5X5Y0 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
HTR3EA5X5Y0 AC142472.1-201ENST00000612013 1741 ntBASIC22.43■■□□□ 1.18
HTR3EA5X5Y0 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HTR3EA5X5Y0 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HTR3EA5X5Y0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HTR3EA5X5Y0 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HTR3EA5X5Y0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.42■■□□□ 1.18
HTR3EA5X5Y0 DUX4L13-201ENST00000554103 1267 ntBASIC22.42■■□□□ 1.18
HTR3EA5X5Y0 DUX4L15-201ENST00000611059 1267 ntBASIC22.42■■□□□ 1.18
HTR3EA5X5Y0 DUX4L23-201ENST00000615195 1269 ntBASIC22.42■■□□□ 1.18
HTR3EA5X5Y0 DUX4L24-201ENST00000617576 1269 ntBASIC22.42■■□□□ 1.18
HTR3EA5X5Y0 DUX4L22-201ENST00000618238 1269 ntBASIC22.42■■□□□ 1.18
HTR3EA5X5Y0 DUX4L20-201ENST00000619712 1269 ntBASIC22.42■■□□□ 1.18
HTR3EA5X5Y0 DUX4L21-201ENST00000622058 1269 ntBASIC22.42■■□□□ 1.18
HTR3EA5X5Y0 DUX4L10-201ENST00000622460 1267 ntBASIC22.42■■□□□ 1.18
HTR3EA5X5Y0 DUX4L25-201ENST00000624915 1269 ntBASIC22.42■■□□□ 1.18
HTR3EA5X5Y0 AP004609.3-201ENST00000610705 1884 ntBASIC22.42■■□□□ 1.18
HTR3EA5X5Y0 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HTR3EA5X5Y0 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HTR3EA5X5Y0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HTR3EA5X5Y0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HTR3EA5X5Y0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HTR3EA5X5Y0 AC133561.1-201ENST00000568600 2415 ntBASIC22.41■■□□□ 1.18
HTR3EA5X5Y0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
HTR3EA5X5Y0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HTR3EA5X5Y0 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
HTR3EA5X5Y0 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.4■■□□□ 1.18
HTR3EA5X5Y0 CLDN5-201ENST00000403084 2357 ntBASIC22.4■■□□□ 1.18
HTR3EA5X5Y0 RPS2P35-201ENST00000443417 897 ntBASIC22.4■■□□□ 1.18
HTR3EA5X5Y0 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
HTR3EA5X5Y0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
HTR3EA5X5Y0 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.4■■□□□ 1.18
HTR3EA5X5Y0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
HTR3EA5X5Y0 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HTR3EA5X5Y0 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
HTR3EA5X5Y0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HTR3EA5X5Y0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.39■■□□□ 1.17
HTR3EA5X5Y0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.39■■□□□ 1.17
HTR3EA5X5Y0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.38■■□□□ 1.17
HTR3EA5X5Y0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
HTR3EA5X5Y0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
HTR3EA5X5Y0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.38■■□□□ 1.17
HTR3EA5X5Y0 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.38■■□□□ 1.17
HTR3EA5X5Y0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.38■■□□□ 1.17
HTR3EA5X5Y0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HTR3EA5X5Y0 AC091060.1-201ENST00000623524 1766 ntBASIC22.38■■□□□ 1.17
HTR3EA5X5Y0 AC145676.1-201ENST00000514988 2004 ntBASIC22.37■■□□□ 1.17
HTR3EA5X5Y0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HTR3EA5X5Y0 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
HTR3EA5X5Y0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
HTR3EA5X5Y0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HTR3EA5X5Y0 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HTR3EA5X5Y0 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
HTR3EA5X5Y0 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
HTR3EA5X5Y0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.36■■□□□ 1.17
HTR3EA5X5Y0 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HTR3EA5X5Y0 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
HTR3EA5X5Y0 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HTR3EA5X5Y0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.35■■□□□ 1.17
HTR3EA5X5Y0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
HTR3EA5X5Y0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HTR3EA5X5Y0 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
HTR3EA5X5Y0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HTR3EA5X5Y0 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HTR3EA5X5Y0 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HTR3EA5X5Y0 AC148477.6-201ENST00000623746 465 ntBASIC22.34■■□□□ 1.17
HTR3EA5X5Y0 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
HTR3EA5X5Y0 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HTR3EA5X5Y0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
HTR3EA5X5Y0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HTR3EA5X5Y0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HTR3EA5X5Y0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms