Protein–RNA interactions for Protein: A0A0J9YX94

PNMA6F, Paraneoplastic antigen Ma6F, humanhuman

Predictions only

Length 578 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6FA0A0J9YX94 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PNMA6FA0A0J9YX94 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PNMA6FA0A0J9YX94 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC28.36■■■□□ 2.13
PNMA6FA0A0J9YX94 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.35■■■□□ 2.13
PNMA6FA0A0J9YX94 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PNMA6FA0A0J9YX94 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
PNMA6FA0A0J9YX94 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC28.34■■■□□ 2.13
PNMA6FA0A0J9YX94 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
PNMA6FA0A0J9YX94 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
PNMA6FA0A0J9YX94 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.33■■■□□ 2.12
PNMA6FA0A0J9YX94 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PNMA6FA0A0J9YX94 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PNMA6FA0A0J9YX94 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.32■■■□□ 2.12
PNMA6FA0A0J9YX94 AC093536.1-201ENST00000569153 554 ntBASIC28.32■■■□□ 2.12
PNMA6FA0A0J9YX94 AC026202.3-201ENST00000600805 1127 ntBASIC28.32■■■□□ 2.12
PNMA6FA0A0J9YX94 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC28.32■■■□□ 2.12
PNMA6FA0A0J9YX94 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
PNMA6FA0A0J9YX94 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.32■■■□□ 2.12
PNMA6FA0A0J9YX94 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC28.32■■■□□ 2.12
PNMA6FA0A0J9YX94 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC28.31■■■□□ 2.12
PNMA6FA0A0J9YX94 AC009831.1-201ENST00000580420 1582 ntBASIC28.31■■■□□ 2.12
PNMA6FA0A0J9YX94 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
PNMA6FA0A0J9YX94 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PNMA6FA0A0J9YX94 AC142472.1-201ENST00000612013 1741 ntBASIC28.3■■■□□ 2.12
PNMA6FA0A0J9YX94 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
PNMA6FA0A0J9YX94 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
PNMA6FA0A0J9YX94 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.29■■■□□ 2.12
PNMA6FA0A0J9YX94 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
PNMA6FA0A0J9YX94 AC133552.2-201ENST00000619106 1032 ntBASIC28.29■■■□□ 2.12
PNMA6FA0A0J9YX94 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC28.29■■■□□ 2.12
PNMA6FA0A0J9YX94 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
PNMA6FA0A0J9YX94 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
PNMA6FA0A0J9YX94 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
PNMA6FA0A0J9YX94 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
PNMA6FA0A0J9YX94 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC28.27■■■□□ 2.12
PNMA6FA0A0J9YX94 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
PNMA6FA0A0J9YX94 AP004609.3-201ENST00000610705 1884 ntBASIC28.27■■■□□ 2.12
PNMA6FA0A0J9YX94 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
PNMA6FA0A0J9YX94 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
PNMA6FA0A0J9YX94 RAP2CP1-202ENST00000605179 643 ntBASIC28.27■■■□□ 2.12
PNMA6FA0A0J9YX94 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.27■■■□□ 2.12
PNMA6FA0A0J9YX94 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
PNMA6FA0A0J9YX94 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.27■■■□□ 2.12
PNMA6FA0A0J9YX94 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.27■■■□□ 2.12
PNMA6FA0A0J9YX94 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PNMA6FA0A0J9YX94 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC28.26■■■□□ 2.11
PNMA6FA0A0J9YX94 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
PNMA6FA0A0J9YX94 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC28.26■■■□□ 2.11
PNMA6FA0A0J9YX94 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
PNMA6FA0A0J9YX94 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
PNMA6FA0A0J9YX94 KRT18P60-201ENST00000312876 1297 ntBASIC28.25■■■□□ 2.11
PNMA6FA0A0J9YX94 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
PNMA6FA0A0J9YX94 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
PNMA6FA0A0J9YX94 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
PNMA6FA0A0J9YX94 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
PNMA6FA0A0J9YX94 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA6FA0A0J9YX94 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC28.24■■■□□ 2.11
PNMA6FA0A0J9YX94 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA6FA0A0J9YX94 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA6FA0A0J9YX94 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
PNMA6FA0A0J9YX94 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
PNMA6FA0A0J9YX94 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
PNMA6FA0A0J9YX94 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC28.23■■■□□ 2.11
PNMA6FA0A0J9YX94 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PNMA6FA0A0J9YX94 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
PNMA6FA0A0J9YX94 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PNMA6FA0A0J9YX94 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
PNMA6FA0A0J9YX94 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC28.23■■■□□ 2.11
PNMA6FA0A0J9YX94 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC28.23■■■□□ 2.11
PNMA6FA0A0J9YX94 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PNMA6FA0A0J9YX94 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.22■■■□□ 2.11
PNMA6FA0A0J9YX94 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
PNMA6FA0A0J9YX94 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
PNMA6FA0A0J9YX94 HES4-204ENST00000484667 667 ntTSL 3 BASIC28.22■■■□□ 2.11
PNMA6FA0A0J9YX94 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
PNMA6FA0A0J9YX94 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC28.22■■■□□ 2.11
PNMA6FA0A0J9YX94 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
PNMA6FA0A0J9YX94 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
PNMA6FA0A0J9YX94 AL592293.1-201ENST00000502889 1188 ntBASIC28.21■■■□□ 2.11
PNMA6FA0A0J9YX94 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC28.21■■■□□ 2.11
PNMA6FA0A0J9YX94 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
PNMA6FA0A0J9YX94 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
PNMA6FA0A0J9YX94 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.2■■■□□ 2.11
PNMA6FA0A0J9YX94 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
PNMA6FA0A0J9YX94 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
PNMA6FA0A0J9YX94 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.19■■■□□ 2.1
PNMA6FA0A0J9YX94 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.19■■■□□ 2.1
PNMA6FA0A0J9YX94 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
PNMA6FA0A0J9YX94 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
PNMA6FA0A0J9YX94 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
PNMA6FA0A0J9YX94 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
PNMA6FA0A0J9YX94 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
PNMA6FA0A0J9YX94 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.17■■■□□ 2.1
PNMA6FA0A0J9YX94 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.16■■■□□ 2.1
PNMA6FA0A0J9YX94 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
PNMA6FA0A0J9YX94 AC012354.3-201ENST00000623734 483 ntBASIC28.16■■■□□ 2.1
PNMA6FA0A0J9YX94 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC28.15■■■□□ 2.1
PNMA6FA0A0J9YX94 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.1
PNMA6FA0A0J9YX94 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC28.15■■■□□ 2.1
PNMA6FA0A0J9YX94 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms