Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 AC142472.1-201ENST00000612013 1741 ntBASIC22.37■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.36■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC22.36■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.35■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.35■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.35■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.34■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 ABHD17AP5-201ENST00000580133 923 ntBASIC22.34■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TNFSF12-TNFSF13A0A0A6YY99 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.32■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.3■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 AL359504.2-201ENST00000605506 1601 ntBASIC22.3■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 AL157400.5-201ENST00000507624 621 ntBASIC22.29■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.28■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 AC092296.2-201ENST00000589470 999 ntBASIC22.28■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 MOB2-207ENST00000614710 705 ntTSL 5 BASIC22.27■■□□□ 1.16
TNFSF12-TNFSF13A0A0A6YY99 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.27■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC22.25■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 ECEL1P2-201ENST00000461596 1295 ntBASIC22.23■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.23■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.23■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC22.23■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC22.22■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.22■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.22■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.21■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC22.21■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
TNFSF12-TNFSF13A0A0A6YY99 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.2■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 AC025884.2-201ENST00000553429 711 ntBASIC22.2■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.19■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.19■■□□□ 1.14
TNFSF12-TNFSF13A0A0A6YY99 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms