Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV30A0A087WSZ9 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV30A0A087WSZ9 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRAV30A0A087WSZ9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV30A0A087WSZ9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAV30A0A087WSZ9 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV30A0A087WSZ9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV30A0A087WSZ9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV30A0A087WSZ9 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV30A0A087WSZ9 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV30A0A087WSZ9 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRAV30A0A087WSZ9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV30A0A087WSZ9 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV30A0A087WSZ9 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV30A0A087WSZ9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
TRAV30A0A087WSZ9 DUSP8P4-201ENST00000399538 1761 ntBASIC19.12■□□□□ 0.65
TRAV30A0A087WSZ9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRAV30A0A087WSZ9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
TRAV30A0A087WSZ9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV30A0A087WSZ9 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
TRAV30A0A087WSZ9 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV30A0A087WSZ9 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRAV30A0A087WSZ9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV30A0A087WSZ9 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV30A0A087WSZ9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV30A0A087WSZ9 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV30A0A087WSZ9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV30A0A087WSZ9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV30A0A087WSZ9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV30A0A087WSZ9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV30A0A087WSZ9 AC148477.6-201ENST00000623746 465 ntBASIC19.11■□□□□ 0.65
TRAV30A0A087WSZ9 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TRAV30A0A087WSZ9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV30A0A087WSZ9 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV30A0A087WSZ9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV30A0A087WSZ9 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV30A0A087WSZ9 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19.1■□□□□ 0.65
TRAV30A0A087WSZ9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV30A0A087WSZ9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV30A0A087WSZ9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV30A0A087WSZ9 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV30A0A087WSZ9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV30A0A087WSZ9 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV30A0A087WSZ9 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAV30A0A087WSZ9 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRAV30A0A087WSZ9 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV30A0A087WSZ9 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV30A0A087WSZ9 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.09■□□□□ 0.65
TRAV30A0A087WSZ9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.09■□□□□ 0.65
TRAV30A0A087WSZ9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV30A0A087WSZ9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV30A0A087WSZ9 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV30A0A087WSZ9 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV30A0A087WSZ9 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV30A0A087WSZ9 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC19.08■□□□□ 0.64
TRAV30A0A087WSZ9 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAV30A0A087WSZ9 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAV30A0A087WSZ9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV30A0A087WSZ9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TRAV30A0A087WSZ9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
TRAV30A0A087WSZ9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV30A0A087WSZ9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TRAV30A0A087WSZ9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV30A0A087WSZ9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
TRAV30A0A087WSZ9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV30A0A087WSZ9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV30A0A087WSZ9 MIR219A2-201ENST00000608502 1504 ntBASIC19.07■□□□□ 0.64
TRAV30A0A087WSZ9 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
TRAV30A0A087WSZ9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV30A0A087WSZ9 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV30A0A087WSZ9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV30A0A087WSZ9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV30A0A087WSZ9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV30A0A087WSZ9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV30A0A087WSZ9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
TRAV30A0A087WSZ9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV30A0A087WSZ9 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV30A0A087WSZ9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV30A0A087WSZ9 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV30A0A087WSZ9 HES6-205ENST00000409356 528 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV30A0A087WSZ9 ZNRF2P2-203ENST00000454624 420 ntBASIC19.06■□□□□ 0.64
TRAV30A0A087WSZ9 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRAV30A0A087WSZ9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TRAV30A0A087WSZ9 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV30A0A087WSZ9 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAV30A0A087WSZ9 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV30A0A087WSZ9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV30A0A087WSZ9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV30A0A087WSZ9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV30A0A087WSZ9 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV30A0A087WSZ9 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV30A0A087WSZ9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.04■□□□□ 0.64
TRAV30A0A087WSZ9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC19.04■□□□□ 0.64
TRAV30A0A087WSZ9 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
TRAV30A0A087WSZ9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV30A0A087WSZ9 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV30A0A087WSZ9 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRAV30A0A087WSZ9 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV30A0A087WSZ9 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRAV30A0A087WSZ9 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms