Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
ODF3Q96PU9 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
ODF3Q96PU9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
ODF3Q96PU9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.17□□□□□ -0.3
ODF3Q96PU9 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
ODF3Q96PU9 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
ODF3Q96PU9 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 AC073508.3-201ENST00000619697 1419 ntBASIC13.16□□□□□ -0.3
ODF3Q96PU9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
ODF3Q96PU9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC13.16□□□□□ -0.3
ODF3Q96PU9 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.16□□□□□ -0.3
ODF3Q96PU9 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.16□□□□□ -0.3
ODF3Q96PU9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ODF3Q96PU9 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC13.16□□□□□ -0.3
ODF3Q96PU9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 AC133561.5-201ENST00000635547 218 ntBASIC13.16□□□□□ -0.3
ODF3Q96PU9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.16□□□□□ -0.3
ODF3Q96PU9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
ODF3Q96PU9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
ODF3Q96PU9 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ODF3Q96PU9 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ODF3Q96PU9 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
ODF3Q96PU9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 RNF152P1-201ENST00000397754 604 ntBASIC13.15□□□□□ -0.3
ODF3Q96PU9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.15□□□□□ -0.3
ODF3Q96PU9 AC139887.4-201ENST00000607877 719 ntBASIC13.15□□□□□ -0.3
ODF3Q96PU9 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 AL645608.8-201ENST00000606034 2086 ntBASIC13.15□□□□□ -0.3
ODF3Q96PU9 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ODF3Q96PU9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ODF3Q96PU9 AL353692.3-201ENST00000407031 1396 ntBASIC13.15□□□□□ -0.3
ODF3Q96PU9 PRORSD1P-202ENST00000563365 2154 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms