Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
APH1BQ8WW43 AC104390.1-201ENST00000555663 520 ntBASIC16.12■□□□□ 0.17
APH1BQ8WW43 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.12■□□□□ 0.17
APH1BQ8WW43 AC009065.1-201ENST00000564055 1225 ntBASIC16.12■□□□□ 0.17
APH1BQ8WW43 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
APH1BQ8WW43 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APH1BQ8WW43 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
APH1BQ8WW43 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APH1BQ8WW43 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.12■□□□□ 0.17
APH1BQ8WW43 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.12■□□□□ 0.17
APH1BQ8WW43 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
APH1BQ8WW43 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
APH1BQ8WW43 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 SLC25A1P4-201ENST00000567977 778 ntBASIC16.11■□□□□ 0.17
APH1BQ8WW43 MIR3180-4-201ENST00000582223 153 ntBASIC16.11■□□□□ 0.17
APH1BQ8WW43 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
APH1BQ8WW43 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
APH1BQ8WW43 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 CR769767.2-201ENST00000622735 460 ntBASIC16.1■□□□□ 0.17
APH1BQ8WW43 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 AC011270.2-201ENST00000624293 2550 ntBASIC16.1■□□□□ 0.17
APH1BQ8WW43 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
APH1BQ8WW43 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.1■□□□□ 0.17
APH1BQ8WW43 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1BQ8WW43 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
APH1BQ8WW43 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1BQ8WW43 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.09■□□□□ 0.17
APH1BQ8WW43 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
APH1BQ8WW43 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms