Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 POR-209ENST00000439269 1858 ntTSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC9.64□□□□□ -0.87
LCA10Q71F78 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 AC092171.3-201ENST00000610122 2651 ntBASIC9.64□□□□□ -0.87
LCA10Q71F78 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 R3HDM2P2-201ENST00000401880 2116 ntBASIC9.64□□□□□ -0.87
LCA10Q71F78 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC9.64□□□□□ -0.87
LCA10Q71F78 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
LCA10Q71F78 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
LCA10Q71F78 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC9.64□□□□□ -0.87
LCA10Q71F78 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
LCA10Q71F78 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC9.64□□□□□ -0.87
LCA10Q71F78 PLD4-205ENST00000553861 667 ntTSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 AC011767.1-201ENST00000617410 1153 ntBASIC9.64□□□□□ -0.87
LCA10Q71F78 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC9.64□□□□□ -0.87
LCA10Q71F78 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 AC018553.1-201ENST00000616682 1458 ntBASIC9.64□□□□□ -0.87
LCA10Q71F78 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 AC144831.1-201ENST00000573312 2656 ntBASIC9.64□□□□□ -0.87
LCA10Q71F78 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC9.64□□□□□ -0.87
LCA10Q71F78 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC9.64□□□□□ -0.87
LCA10Q71F78 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
LCA10Q71F78 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 AC010980.2-201ENST00000587099 1412 ntBASIC9.64□□□□□ -0.87
LCA10Q71F78 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC9.64□□□□□ -0.87
LCA10Q71F78 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC9.64□□□□□ -0.87
LCA10Q71F78 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
LCA10Q71F78 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
LCA10Q71F78 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
LCA10Q71F78 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC9.63□□□□□ -0.87
LCA10Q71F78 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
LCA10Q71F78 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC9.63□□□□□ -0.87
LCA10Q71F78 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC9.63□□□□□ -0.87
LCA10Q71F78 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
LCA10Q71F78 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC9.63□□□□□ -0.87
LCA10Q71F78 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC9.63□□□□□ -0.87
LCA10Q71F78 TNRC18P2-201ENST00000417666 2714 ntBASIC9.63□□□□□ -0.87
LCA10Q71F78 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms