Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DQA1Q5Y7H0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DQA1Q5Y7H0 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DQA1Q5Y7H0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DQA1Q5Y7H0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DQA1Q5Y7H0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DQA1Q5Y7H0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DQA1Q5Y7H0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DQA1Q5Y7H0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HLA-DQA1Q5Y7H0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.63■□□□□ 0.25
HLA-DQA1Q5Y7H0 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DQA1Q5Y7H0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DQA1Q5Y7H0 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DQA1Q5Y7H0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HLA-DQA1Q5Y7H0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 DRAXINP1-201ENST00000437611 948 ntBASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HLA-DQA1Q5Y7H0 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 HCG4P8-203ENST00000443049 980 ntBASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 TOB2P1-201ENST00000469761 992 ntBASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 AP000867.3-201ENST00000524675 377 ntBASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.61■□□□□ 0.25
HLA-DQA1Q5Y7H0 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HLA-DQA1Q5Y7H0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms