Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.57■□□□□ 0.56
YJEFN3A6XGL0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.56■□□□□ 0.56
YJEFN3A6XGL0 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 AL133373.2-201ENST00000623187 2828 ntBASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.55■□□□□ 0.56
YJEFN3A6XGL0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.54■□□□□ 0.56
YJEFN3A6XGL0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms