Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 PCDHA1-201ENST00000378133 2726 ntBASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 MFAP1P1-201ENST00000442257 1255 ntBASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 AC073195.1-201ENST00000607241 877 ntBASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
TCRBV3S1A0A5B6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 LINC02199-201ENST00000506655 2702 ntBASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TCRBV3S1A0A5B6 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 LYSMD4-203ENST00000378904 2122 ntBASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TCRBV3S1A0A5B6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms